Strain Fitness in Escherichia coli ECOR27 around NOLOHH_14495

Experiment: Bas37

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntnuoG and nuoH overlap by 4 nucleotidesnuoH and nuoI are separated by 14 nucleotidesnuoI and nuoJ are separated by 11 nucleotidesnuoJ and nuoK overlap by 4 nucleotidesnuoK and nuoL overlap by 4 nucleotides NOLOHH_14485: nuoG - NADH-quinone oxidoreductase subunit NuoG, at 2,821,839 to 2,824,565 nuoG NOLOHH_14490: nuoH - NADH-quinone oxidoreductase subunit NuoH, at 2,824,562 to 2,825,539 nuoH NOLOHH_14495: nuoI - NADH-quinone oxidoreductase subunit NuoI, at 2,825,554 to 2,826,096 nuoI NOLOHH_14500: nuoJ - NADH-quinone oxidoreductase subunit J, at 2,826,108 to 2,826,662 nuoJ NOLOHH_14505: nuoK - NADH-quinone oxidoreductase subunit NuoK, at 2,826,659 to 2,826,961 nuoK NOLOHH_14510: nuoL - NADH-quinone oxidoreductase subunit L, at 2,826,958 to 2,828,799 nuoL Position (kb) 2825 2826 2827Strain fitness (log2 ratio) -3 -2 -1 0 1at 2824.982 kb on + strand, within nuoHat 2824.982 kb on + strand, within nuoHat 2824.982 kb on + strand, within nuoHat 2824.982 kb on + strand, within nuoHat 2824.983 kb on - strand, within nuoHat 2825.149 kb on + strand, within nuoHat 2825.150 kb on - strand, within nuoHat 2825.178 kb on + strand, within nuoHat 2825.246 kb on + strand, within nuoHat 2825.285 kb on + strand, within nuoHat 2825.286 kb on - strand, within nuoHat 2825.395 kb on + strand, within nuoHat 2825.451 kb on + strandat 2825.561 kb on + strandat 2825.574 kb on - strandat 2825.598 kb on + strandat 2825.601 kb on + strandat 2825.743 kb on - strand, within nuoIat 2825.775 kb on + strand, within nuoIat 2825.926 kb on + strand, within nuoIat 2825.926 kb on + strand, within nuoIat 2825.927 kb on - strand, within nuoIat 2825.996 kb on - strand, within nuoIat 2825.998 kb on - strand, within nuoIat 2826.005 kb on - strand, within nuoIat 2826.039 kb on + strand, within nuoIat 2826.145 kb on + strandat 2826.145 kb on + strandat 2826.145 kb on + strandat 2826.174 kb on - strand, within nuoJat 2826.199 kb on - strand, within nuoJat 2826.199 kb on - strand, within nuoJat 2826.207 kb on - strand, within nuoJat 2826.282 kb on + strand, within nuoJat 2826.296 kb on + strand, within nuoJat 2826.500 kb on + strand, within nuoJat 2826.500 kb on + strand, within nuoJat 2826.500 kb on + strand, within nuoJat 2826.516 kb on + strand, within nuoJat 2826.520 kb on + strand, within nuoJat 2826.542 kb on + strand, within nuoJat 2826.542 kb on + strand, within nuoJat 2826.543 kb on - strand, within nuoJat 2826.544 kb on + strand, within nuoJat 2826.748 kb on + strand, within nuoKat 2826.775 kb on + strand, within nuoKat 2826.842 kb on + strand, within nuoKat 2826.842 kb on + strand, within nuoKat 2826.843 kb on - strand, within nuoKat 2826.843 kb on - strand, within nuoKat 2826.843 kb on - strand, within nuoK

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas37
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2,824,982 + nuoH NOLOHH_14490 0.43 -0.9
2,824,982 + nuoH NOLOHH_14490 0.43 -0.8
2,824,982 + nuoH NOLOHH_14490 0.43 -0.3
2,824,982 + nuoH NOLOHH_14490 0.43 -1.3
2,824,983 - nuoH NOLOHH_14490 0.43 -1.2
2,825,149 + nuoH NOLOHH_14490 0.60 +1.0
2,825,150 - nuoH NOLOHH_14490 0.60 -1.5
2,825,178 + nuoH NOLOHH_14490 0.63 -1.9
2,825,246 + nuoH NOLOHH_14490 0.70 -0.2
2,825,285 + nuoH NOLOHH_14490 0.74 -1.4
2,825,286 - nuoH NOLOHH_14490 0.74 -0.8
2,825,395 + nuoH NOLOHH_14490 0.85 -2.6
2,825,451 + -0.7
2,825,561 + +0.3
2,825,574 - +0.8
2,825,598 + +0.5
2,825,601 + +0.1
2,825,743 - nuoI NOLOHH_14495 0.35 +0.1
2,825,775 + nuoI NOLOHH_14495 0.41 -1.1
2,825,926 + nuoI NOLOHH_14495 0.69 -0.4
2,825,926 + nuoI NOLOHH_14495 0.69 -0.4
2,825,927 - nuoI NOLOHH_14495 0.69 -3.2
2,825,996 - nuoI NOLOHH_14495 0.81 +1.0
2,825,998 - nuoI NOLOHH_14495 0.82 -0.4
2,826,005 - nuoI NOLOHH_14495 0.83 +0.1
2,826,039 + nuoI NOLOHH_14495 0.89 -0.1
2,826,145 + -0.4
2,826,145 + -0.3
2,826,145 + -1.1
2,826,174 - nuoJ NOLOHH_14500 0.12 -2.2
2,826,199 - nuoJ NOLOHH_14500 0.16 -0.1
2,826,199 - nuoJ NOLOHH_14500 0.16 -0.7
2,826,207 - nuoJ NOLOHH_14500 0.18 +0.1
2,826,282 + nuoJ NOLOHH_14500 0.31 -1.2
2,826,296 + nuoJ NOLOHH_14500 0.34 -0.8
2,826,500 + nuoJ NOLOHH_14500 0.71 +0.4
2,826,500 + nuoJ NOLOHH_14500 0.71 +1.4
2,826,500 + nuoJ NOLOHH_14500 0.71 -1.4
2,826,516 + nuoJ NOLOHH_14500 0.74 -0.9
2,826,520 + nuoJ NOLOHH_14500 0.74 -0.6
2,826,542 + nuoJ NOLOHH_14500 0.78 -1.6
2,826,542 + nuoJ NOLOHH_14500 0.78 -2.3
2,826,543 - nuoJ NOLOHH_14500 0.78 -1.1
2,826,544 + nuoJ NOLOHH_14500 0.79 -1.0
2,826,748 + nuoK NOLOHH_14505 0.29 +0.4
2,826,775 + nuoK NOLOHH_14505 0.38 -2.2
2,826,842 + nuoK NOLOHH_14505 0.60 +0.9
2,826,842 + nuoK NOLOHH_14505 0.60 -1.9
2,826,843 - nuoK NOLOHH_14505 0.61 -2.1
2,826,843 - nuoK NOLOHH_14505 0.61 -1.6
2,826,843 - nuoK NOLOHH_14505 0.61 -0.8

Or see this region's nucleotide sequence