Experiment: Bas37
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt nuoG and nuoH overlap by 4 nucleotides nuoH and nuoI are separated by 14 nucleotides nuoI and nuoJ are separated by 11 nucleotides nuoJ and nuoK overlap by 4 nucleotides nuoK and nuoL overlap by 4 nucleotides
NOLOHH_14485: nuoG - NADH-quinone oxidoreductase subunit NuoG, at 2,821,839 to 2,824,565
nuoG
NOLOHH_14490: nuoH - NADH-quinone oxidoreductase subunit NuoH, at 2,824,562 to 2,825,539
nuoH
NOLOHH_14495: nuoI - NADH-quinone oxidoreductase subunit NuoI, at 2,825,554 to 2,826,096
nuoI
NOLOHH_14500: nuoJ - NADH-quinone oxidoreductase subunit J, at 2,826,108 to 2,826,662
nuoJ
NOLOHH_14505: nuoK - NADH-quinone oxidoreductase subunit NuoK, at 2,826,659 to 2,826,961
nuoK
NOLOHH_14510: nuoL - NADH-quinone oxidoreductase subunit L, at 2,826,958 to 2,828,799
nuoL
Position (kb)
2825
2826
2827 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2824.982 kb on + strand, within nuoH at 2824.982 kb on + strand, within nuoH at 2824.982 kb on + strand, within nuoH at 2824.982 kb on + strand, within nuoH at 2824.983 kb on - strand, within nuoH at 2825.149 kb on + strand, within nuoH at 2825.150 kb on - strand, within nuoH at 2825.178 kb on + strand, within nuoH at 2825.246 kb on + strand, within nuoH at 2825.285 kb on + strand, within nuoH at 2825.286 kb on - strand, within nuoH at 2825.395 kb on + strand, within nuoH at 2825.451 kb on + strand at 2825.561 kb on + strand at 2825.574 kb on - strand at 2825.598 kb on + strand at 2825.601 kb on + strand at 2825.743 kb on - strand, within nuoI at 2825.775 kb on + strand, within nuoI at 2825.926 kb on + strand, within nuoI at 2825.926 kb on + strand, within nuoI at 2825.927 kb on - strand, within nuoI at 2825.996 kb on - strand, within nuoI at 2825.998 kb on - strand, within nuoI at 2826.005 kb on - strand, within nuoI at 2826.039 kb on + strand, within nuoI at 2826.145 kb on + strand at 2826.145 kb on + strand at 2826.145 kb on + strand at 2826.174 kb on - strand, within nuoJ at 2826.199 kb on - strand, within nuoJ at 2826.199 kb on - strand, within nuoJ at 2826.207 kb on - strand, within nuoJ at 2826.282 kb on + strand, within nuoJ at 2826.296 kb on + strand, within nuoJ at 2826.500 kb on + strand, within nuoJ at 2826.500 kb on + strand, within nuoJ at 2826.500 kb on + strand, within nuoJ at 2826.516 kb on + strand, within nuoJ at 2826.520 kb on + strand, within nuoJ at 2826.542 kb on + strand, within nuoJ at 2826.542 kb on + strand, within nuoJ at 2826.543 kb on - strand, within nuoJ at 2826.544 kb on + strand, within nuoJ at 2826.748 kb on + strand, within nuoK at 2826.775 kb on + strand, within nuoK at 2826.842 kb on + strand, within nuoK at 2826.842 kb on + strand, within nuoK at 2826.843 kb on - strand, within nuoK at 2826.843 kb on - strand, within nuoK at 2826.843 kb on - strand, within nuoK
Per-strain Table
Position Strand Gene LocusTag Fraction Bas37 remove 2,824,982 + nuoH NOLOHH_14490 0.43 -0.9 2,824,982 + nuoH NOLOHH_14490 0.43 -0.8 2,824,982 + nuoH NOLOHH_14490 0.43 -0.3 2,824,982 + nuoH NOLOHH_14490 0.43 -1.3 2,824,983 - nuoH NOLOHH_14490 0.43 -1.2 2,825,149 + nuoH NOLOHH_14490 0.60 +1.0 2,825,150 - nuoH NOLOHH_14490 0.60 -1.5 2,825,178 + nuoH NOLOHH_14490 0.63 -1.9 2,825,246 + nuoH NOLOHH_14490 0.70 -0.2 2,825,285 + nuoH NOLOHH_14490 0.74 -1.4 2,825,286 - nuoH NOLOHH_14490 0.74 -0.8 2,825,395 + nuoH NOLOHH_14490 0.85 -2.6 2,825,451 + -0.7 2,825,561 + +0.3 2,825,574 - +0.8 2,825,598 + +0.5 2,825,601 + +0.1 2,825,743 - nuoI NOLOHH_14495 0.35 +0.1 2,825,775 + nuoI NOLOHH_14495 0.41 -1.1 2,825,926 + nuoI NOLOHH_14495 0.69 -0.4 2,825,926 + nuoI NOLOHH_14495 0.69 -0.4 2,825,927 - nuoI NOLOHH_14495 0.69 -3.2 2,825,996 - nuoI NOLOHH_14495 0.81 +1.0 2,825,998 - nuoI NOLOHH_14495 0.82 -0.4 2,826,005 - nuoI NOLOHH_14495 0.83 +0.1 2,826,039 + nuoI NOLOHH_14495 0.89 -0.1 2,826,145 + -0.4 2,826,145 + -0.3 2,826,145 + -1.1 2,826,174 - nuoJ NOLOHH_14500 0.12 -2.2 2,826,199 - nuoJ NOLOHH_14500 0.16 -0.1 2,826,199 - nuoJ NOLOHH_14500 0.16 -0.7 2,826,207 - nuoJ NOLOHH_14500 0.18 +0.1 2,826,282 + nuoJ NOLOHH_14500 0.31 -1.2 2,826,296 + nuoJ NOLOHH_14500 0.34 -0.8 2,826,500 + nuoJ NOLOHH_14500 0.71 +0.4 2,826,500 + nuoJ NOLOHH_14500 0.71 +1.4 2,826,500 + nuoJ NOLOHH_14500 0.71 -1.4 2,826,516 + nuoJ NOLOHH_14500 0.74 -0.9 2,826,520 + nuoJ NOLOHH_14500 0.74 -0.6 2,826,542 + nuoJ NOLOHH_14500 0.78 -1.6 2,826,542 + nuoJ NOLOHH_14500 0.78 -2.3 2,826,543 - nuoJ NOLOHH_14500 0.78 -1.1 2,826,544 + nuoJ NOLOHH_14500 0.79 -1.0 2,826,748 + nuoK NOLOHH_14505 0.29 +0.4 2,826,775 + nuoK NOLOHH_14505 0.38 -2.2 2,826,842 + nuoK NOLOHH_14505 0.60 +0.9 2,826,842 + nuoK NOLOHH_14505 0.60 -1.9 2,826,843 - nuoK NOLOHH_14505 0.61 -2.1 2,826,843 - nuoK NOLOHH_14505 0.61 -1.6 2,826,843 - nuoK NOLOHH_14505 0.61 -0.8
Or see this region's nucleotide sequence