Experiment: Bas37
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt guaA and yfgI are separated by 94 nucleotides yfgI and yfgH are separated by 15 nucleotides yfgH and yfgG are separated by 313 nucleotides
NOLOHH_13415: guaA - glutamine-hydrolyzing GMP synthase, at 2,605,420 to 2,606,997
guaA
NOLOHH_13420: yfgI - Uncharacterized protein YfgI, at 2,607,092 to 2,607,631
yfgI
NOLOHH_13425: yfgH - Uncharacterized lipoprotein YfgH, at 2,607,647 to 2,608,162
yfgH
NOLOHH_13430: yfgG - Uncharacterized protein YfgG, at 2,608,476 to 2,608,649
yfgG
Position (kb)
2607
2608 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2606.244 kb on + strand, within guaA at 2606.431 kb on + strand, within guaA at 2606.919 kb on + strand at 2606.937 kb on + strand at 2607.036 kb on + strand at 2607.169 kb on + strand, within yfgI at 2607.377 kb on - strand, within yfgI at 2607.394 kb on + strand, within yfgI at 2607.524 kb on - strand, within yfgI at 2607.589 kb on - strand at 2607.649 kb on - strand at 2607.649 kb on - strand at 2607.649 kb on - strand at 2607.671 kb on - strand at 2607.671 kb on - strand at 2607.720 kb on - strand, within yfgH at 2607.764 kb on - strand, within yfgH at 2607.764 kb on - strand, within yfgH at 2607.764 kb on - strand, within yfgH at 2607.765 kb on + strand, within yfgH at 2607.765 kb on + strand, within yfgH at 2607.766 kb on - strand, within yfgH at 2607.766 kb on - strand, within yfgH at 2607.766 kb on - strand, within yfgH at 2607.785 kb on - strand, within yfgH at 2607.785 kb on - strand, within yfgH at 2607.785 kb on - strand, within yfgH at 2607.785 kb on - strand, within yfgH at 2607.830 kb on - strand, within yfgH at 2607.830 kb on - strand, within yfgH at 2608.590 kb on - strand, within yfgG at 2608.590 kb on - strand, within yfgG
Per-strain Table
Position Strand Gene LocusTag Fraction Bas37 remove 2,606,244 + guaA NOLOHH_13415 0.52 -1.1 2,606,431 + guaA NOLOHH_13415 0.64 -0.8 2,606,919 + +0.0 2,606,937 + -2.7 2,607,036 + -0.7 2,607,169 + yfgI NOLOHH_13420 0.14 -0.9 2,607,377 - yfgI NOLOHH_13420 0.53 -0.5 2,607,394 + yfgI NOLOHH_13420 0.56 -0.0 2,607,524 - yfgI NOLOHH_13420 0.80 -1.4 2,607,589 - -0.3 2,607,649 - -0.4 2,607,649 - +0.3 2,607,649 - -0.2 2,607,671 - +0.1 2,607,671 - +1.4 2,607,720 - yfgH NOLOHH_13425 0.14 +0.7 2,607,764 - yfgH NOLOHH_13425 0.23 +0.5 2,607,764 - yfgH NOLOHH_13425 0.23 +0.3 2,607,764 - yfgH NOLOHH_13425 0.23 +0.7 2,607,765 + yfgH NOLOHH_13425 0.23 +0.4 2,607,765 + yfgH NOLOHH_13425 0.23 +2.0 2,607,766 - yfgH NOLOHH_13425 0.23 -0.1 2,607,766 - yfgH NOLOHH_13425 0.23 +0.7 2,607,766 - yfgH NOLOHH_13425 0.23 -0.3 2,607,785 - yfgH NOLOHH_13425 0.27 +0.7 2,607,785 - yfgH NOLOHH_13425 0.27 +0.4 2,607,785 - yfgH NOLOHH_13425 0.27 -1.4 2,607,785 - yfgH NOLOHH_13425 0.27 -1.2 2,607,830 - yfgH NOLOHH_13425 0.35 +0.3 2,607,830 - yfgH NOLOHH_13425 0.35 +0.8 2,608,590 - yfgG NOLOHH_13430 0.66 -0.4 2,608,590 - yfgG NOLOHH_13430 0.66 -0.1
Or see this region's nucleotide sequence