Strain Fitness in Escherichia coli ECOR27 around NOLOHH_12505

Experiment: Bas37

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas37
2,431,843	+				-0.1
2,431,843	+				-0.4
2,431,844	-				+0.2
2,431,844	-				-0.4
2,431,857	+				-0.3
2,431,857	+				+2.5
2,431,858	-				+1.1
2,431,873	+				+0.1
2,431,976	+	gutQ	NOLOHH_12500	0.14	+2.2
2,432,008	+	gutQ	NOLOHH_12500	0.18	-0.1
2,432,009	-	gutQ	NOLOHH_12500	0.18	+0.8
2,432,079	-	gutQ	NOLOHH_12500	0.25	+0.5
2,432,079	-	gutQ	NOLOHH_12500	0.25	+0.0
2,432,079	-	gutQ	NOLOHH_12500	0.25	+0.4
2,432,099	+	gutQ	NOLOHH_12500	0.27	-0.1
2,432,099	+	gutQ	NOLOHH_12500	0.27	-0.4
2,432,273	-	gutQ	NOLOHH_12500	0.45	-0.1
2,432,386	+	gutQ	NOLOHH_12500	0.57	+0.3
2,432,456	-	gutQ	NOLOHH_12500	0.64	-0.3
2,432,462	-	gutQ	NOLOHH_12500	0.65	+0.3
2,432,462	-	gutQ	NOLOHH_12500	0.65	+0.3
2,432,462	-	gutQ	NOLOHH_12500	0.65	-0.5
2,432,462	-	gutQ	NOLOHH_12500	0.65	+0.5
2,432,480	-	gutQ	NOLOHH_12500	0.66	+1.3
2,432,511	+	gutQ	NOLOHH_12500	0.70	+1.1
2,432,512	-	gutQ	NOLOHH_12500	0.70	+0.1
2,432,518	+	gutQ	NOLOHH_12500	0.70	+0.6
2,432,518	+	gutQ	NOLOHH_12500	0.70	+0.5
2,432,519	-	gutQ	NOLOHH_12500	0.70	-0.2
2,432,736	-				-0.2
2,432,916	+	srlR	NOLOHH_12505	0.16	-3.5
2,432,917	-	srlR	NOLOHH_12505	0.16	+0.1
2,432,917	-	srlR	NOLOHH_12505	0.16	-0.1
2,432,930	+	srlR	NOLOHH_12505	0.17	-0.5
2,432,993	+	srlR	NOLOHH_12505	0.25	-0.6
2,433,004	+	srlR	NOLOHH_12505	0.27	-0.0
2,433,004	+	srlR	NOLOHH_12505	0.27	-0.8
2,433,005	-	srlR	NOLOHH_12505	0.27	-2.6
2,433,005	-	srlR	NOLOHH_12505	0.27	-1.0
2,433,005	-	srlR	NOLOHH_12505	0.27	-3.0
2,433,005	-	srlR	NOLOHH_12505	0.27	-0.6
2,433,025	-	srlR	NOLOHH_12505	0.30	-0.6
2,433,068	+	srlR	NOLOHH_12505	0.35	-1.2
2,433,158	+	srlR	NOLOHH_12505	0.47	+0.9
2,433,159	-	srlR	NOLOHH_12505	0.47	+0.6
2,433,159	-	srlR	NOLOHH_12505	0.47	-1.0
2,433,197	+	srlR	NOLOHH_12505	0.52	+0.5
2,433,231	-	srlR	NOLOHH_12505	0.56	-1.2
2,433,231	-	srlR	NOLOHH_12505	0.56	-0.2
2,433,363	-	srlR	NOLOHH_12505	0.73	-2.3
2,433,413	-	srlR	NOLOHH_12505	0.80	+0.0
2,433,488	-	srlR	NOLOHH_12505	0.89	-0.9
2,433,488	-	srlR	NOLOHH_12505	0.89	-0.8
2,433,516	-				-0.2
2,433,589	-				+0.9
2,433,666	+				-0.2
2,433,667	-				-0.1
2,433,732	-	gutM	NOLOHH_12510	0.27	+0.4
2,433,894	+	gutM	NOLOHH_12510	0.72	+0.1
2,433,895	-	gutM	NOLOHH_12510	0.72	+0.6
2,433,914	+	gutM	NOLOHH_12510	0.77	-0.3
2,434,011	+				+0.1
2,434,011	+				+0.6
2,434,012	-				+0.1
2,434,029	-				-0.7
2,434,029	-				+0.4
2,434,060	+				-0.1
2,434,060	+				-1.8
2,434,060	+				-0.9
2,434,060	+				+0.1
2,434,060	+				-1.5
2,434,061	-				+1.4
2,434,061	-				+0.8
2,434,061	-				-0.3
2,434,061	-				-0.1
2,434,061	-				-0.1
2,434,061	-				+0.4
2,434,061	-				+0.3
2,434,061	-				+0.6
2,434,061	-				-0.9
2,434,061	-				+0.5
2,434,061	-				-0.2
2,434,061	-				-0.7
2,434,170	+				-0.1
2,434,170	+				-0.1
2,434,171	-				+0.4
2,434,183	+	srlD	NOLOHH_12515	0.11	+0.4
2,434,224	-	srlD	NOLOHH_12515	0.16	-1.0
2,434,236	+	srlD	NOLOHH_12515	0.17	+0.6
2,434,236	+	srlD	NOLOHH_12515	0.17	+0.1
2,434,236	+	srlD	NOLOHH_12515	0.17	+3.2
2,434,236	+	srlD	NOLOHH_12515	0.17	+0.1
2,434,237	-	srlD	NOLOHH_12515	0.18	-1.1
2,434,237	-	srlD	NOLOHH_12515	0.18	+0.0
2,434,237	-	srlD	NOLOHH_12515	0.18	+0.1
2,434,240	-	srlD	NOLOHH_12515	0.18	+0.1
2,434,282	-	srlD	NOLOHH_12515	0.23	+0.0
2,434,348	+	srlD	NOLOHH_12515	0.32	+0.6
2,434,533	+	srlD	NOLOHH_12515	0.56	+0.1
2,434,553	+	srlD	NOLOHH_12515	0.58	-0.8