Experiment: Bas37
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt wzzE and wecA are separated by 11 nucleotides wecA and NOLOHH_06720 are separated by 11 nucleotides NOLOHH_06720 and rho are separated by 9 nucleotides
NOLOHH_06710: wzzE - ECA polysaccharide chain length modulation protein, at 1,264,547 to 1,265,593
wzzE
NOLOHH_06715: wecA - UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase, at 1,265,605 to 1,266,708
wecA
NOLOHH_06720: NOLOHH_06720 - hypothetical protein, at 1,266,720 to 1,266,938
_06720
NOLOHH_06725: rho - transcription termination factor Rho, at 1,266,948 to 1,268,207
rho
Position (kb) 1265
1266
1267 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2 at 1264.612 kb on + strand at 1264.612 kb on + strand at 1264.612 kb on + strand at 1264.612 kb on + strand at 1264.613 kb on - strand at 1264.613 kb on - strand at 1264.667 kb on - strand, within wzzE at 1264.727 kb on + strand, within wzzE at 1264.728 kb on - strand, within wzzE at 1264.749 kb on + strand, within wzzE at 1264.750 kb on - strand, within wzzE at 1264.750 kb on - strand, within wzzE at 1264.841 kb on + strand, within wzzE at 1264.879 kb on + strand, within wzzE at 1264.879 kb on + strand, within wzzE at 1264.879 kb on + strand, within wzzE at 1264.936 kb on - strand, within wzzE at 1264.936 kb on - strand, within wzzE at 1264.936 kb on - strand, within wzzE at 1265.061 kb on + strand, within wzzE at 1265.061 kb on + strand, within wzzE at 1265.061 kb on + strand, within wzzE at 1265.062 kb on - strand, within wzzE at 1265.062 kb on - strand, within wzzE at 1265.070 kb on - strand, within wzzE at 1265.070 kb on - strand, within wzzE at 1265.070 kb on - strand, within wzzE at 1265.104 kb on + strand, within wzzE at 1265.104 kb on + strand, within wzzE at 1265.223 kb on + strand, within wzzE at 1265.223 kb on + strand, within wzzE at 1265.223 kb on + strand, within wzzE at 1265.223 kb on + strand, within wzzE at 1265.223 kb on + strand, within wzzE at 1265.223 kb on + strand, within wzzE at 1265.224 kb on - strand, within wzzE at 1265.224 kb on - strand, within wzzE at 1265.224 kb on - strand, within wzzE at 1265.226 kb on + strand, within wzzE at 1265.227 kb on - strand, within wzzE at 1265.278 kb on + strand, within wzzE at 1265.290 kb on + strand, within wzzE at 1265.292 kb on + strand, within wzzE at 1265.292 kb on + strand, within wzzE at 1265.293 kb on - strand, within wzzE at 1265.293 kb on - strand, within wzzE at 1265.377 kb on - strand, within wzzE at 1265.380 kb on - strand, within wzzE at 1265.380 kb on - strand, within wzzE at 1265.392 kb on + strand, within wzzE at 1265.392 kb on + strand, within wzzE at 1265.392 kb on + strand, within wzzE at 1265.392 kb on + strand, within wzzE at 1265.393 kb on - strand, within wzzE at 1265.393 kb on - strand, within wzzE at 1265.393 kb on - strand, within wzzE at 1265.393 kb on - strand, within wzzE at 1265.393 kb on - strand, within wzzE at 1265.393 kb on - strand, within wzzE at 1265.393 kb on - strand, within wzzE at 1265.452 kb on + strand, within wzzE at 1265.455 kb on - strand, within wzzE at 1265.495 kb on - strand at 1265.606 kb on + strand at 1265.607 kb on - strand at 1265.656 kb on + strand at 1265.664 kb on + strand at 1265.709 kb on - strand at 1265.709 kb on - strand at 1265.768 kb on + strand, within wecA at 1265.841 kb on + strand, within wecA at 1265.871 kb on + strand, within wecA at 1265.872 kb on - strand, within wecA at 1265.872 kb on - strand, within wecA at 1265.872 kb on - strand, within wecA at 1265.908 kb on - strand, within wecA at 1265.921 kb on + strand, within wecA at 1265.922 kb on - strand, within wecA at 1265.922 kb on - strand, within wecA at 1265.922 kb on - strand, within wecA at 1265.925 kb on + strand, within wecA at 1265.926 kb on - strand, within wecA at 1265.937 kb on + strand, within wecA at 1266.027 kb on + strand, within wecA at 1266.049 kb on - strand, within wecA at 1266.093 kb on + strand, within wecA at 1266.113 kb on + strand, within wecA at 1266.113 kb on + strand, within wecA at 1266.113 kb on + strand, within wecA at 1266.113 kb on + strand, within wecA at 1266.113 kb on + strand, within wecA at 1266.114 kb on - strand, within wecA at 1266.114 kb on - strand, within wecA at 1266.114 kb on - strand, within wecA at 1266.114 kb on - strand, within wecA at 1266.261 kb on + strand, within wecA at 1266.283 kb on + strand, within wecA at 1266.284 kb on - strand, within wecA at 1266.296 kb on + strand, within wecA at 1266.296 kb on + strand, within wecA at 1266.336 kb on + strand, within wecA at 1266.336 kb on + strand, within wecA at 1266.336 kb on + strand, within wecA at 1266.336 kb on + strand, within wecA at 1266.336 kb on + strand, within wecA at 1266.336 kb on + strand, within wecA at 1266.337 kb on - strand, within wecA at 1266.337 kb on - strand, within wecA at 1266.337 kb on - strand, within wecA at 1266.337 kb on - strand, within wecA at 1266.337 kb on - strand, within wecA at 1266.337 kb on - strand, within wecA at 1266.337 kb on - strand, within wecA at 1266.337 kb on - strand, within wecA at 1266.338 kb on + strand, within wecA at 1266.338 kb on + strand, within wecA at 1266.339 kb on - strand, within wecA at 1266.339 kb on - strand, within wecA at 1266.339 kb on - strand, within wecA at 1266.349 kb on - strand, within wecA at 1266.356 kb on + strand, within wecA at 1266.356 kb on + strand, within wecA at 1266.357 kb on - strand, within wecA at 1266.378 kb on + strand, within wecA at 1266.378 kb on + strand, within wecA at 1266.378 kb on + strand, within wecA at 1266.378 kb on + strand, within wecA at 1266.378 kb on + strand, within wecA at 1266.378 kb on + strand, within wecA at 1266.379 kb on - strand, within wecA at 1266.379 kb on - strand, within wecA at 1266.379 kb on - strand, within wecA at 1266.379 kb on - strand, within wecA at 1266.379 kb on - strand, within wecA at 1266.400 kb on + strand, within wecA at 1266.401 kb on - strand, within wecA at 1266.426 kb on + strand, within wecA at 1266.427 kb on - strand, within wecA at 1266.483 kb on - strand, within wecA at 1266.501 kb on + strand, within wecA at 1266.502 kb on - strand, within wecA at 1266.502 kb on - strand, within wecA at 1266.502 kb on - strand, within wecA at 1266.502 kb on - strand, within wecA at 1266.503 kb on + strand, within wecA at 1266.503 kb on + strand, within wecA at 1266.503 kb on + strand, within wecA at 1266.503 kb on + strand, within wecA at 1266.504 kb on - strand, within wecA at 1266.504 kb on - strand, within wecA at 1266.504 kb on - strand, within wecA at 1266.507 kb on - strand, within wecA at 1266.507 kb on - strand, within wecA at 1266.507 kb on - strand, within wecA at 1266.542 kb on + strand, within wecA at 1266.543 kb on - strand, within wecA at 1266.568 kb on + strand, within wecA at 1266.568 kb on + strand, within wecA at 1266.568 kb on + strand, within wecA at 1266.569 kb on - strand, within wecA at 1266.569 kb on - strand, within wecA at 1266.611 kb on - strand at 1266.665 kb on - strand at 1266.687 kb on + strand at 1266.743 kb on + strand, within NOLOHH_06720 at 1266.744 kb on - strand, within NOLOHH_06720 at 1266.744 kb on - strand, within NOLOHH_06720 at 1266.744 kb on - strand, within NOLOHH_06720 at 1266.746 kb on - strand, within NOLOHH_06720 at 1266.864 kb on + strand, within NOLOHH_06720 at 1266.865 kb on - strand, within NOLOHH_06720 at 1266.890 kb on + strand, within NOLOHH_06720 at 1266.897 kb on - strand, within NOLOHH_06720 at 1266.897 kb on - strand, within NOLOHH_06720 at 1266.897 kb on - strand, within NOLOHH_06720 at 1266.898 kb on + strand, within NOLOHH_06720 at 1266.898 kb on + strand, within NOLOHH_06720 at 1266.898 kb on + strand, within NOLOHH_06720 at 1266.899 kb on - strand, within NOLOHH_06720 at 1266.899 kb on - strand, within NOLOHH_06720 at 1266.899 kb on - strand, within NOLOHH_06720 at 1266.899 kb on - strand, within NOLOHH_06720 at 1266.917 kb on - strand at 1266.917 kb on - strand at 1266.917 kb on - strand at 1266.938 kb on + strand at 1266.938 kb on + strand at 1266.949 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas37 remove 1,264,612 + +0.3 1,264,612 + -0.9 1,264,612 + -0.5 1,264,612 + +0.4 1,264,613 - +0.1 1,264,613 - +0.8 1,264,667 - wzzE NOLOHH_06710 0.11 +0.1 1,264,727 + wzzE NOLOHH_06710 0.17 +0.5 1,264,728 - wzzE NOLOHH_06710 0.17 -0.5 1,264,749 + wzzE NOLOHH_06710 0.19 -0.1 1,264,750 - wzzE NOLOHH_06710 0.19 +0.2 1,264,750 - wzzE NOLOHH_06710 0.19 -0.4 1,264,841 + wzzE NOLOHH_06710 0.28 -0.6 1,264,879 + wzzE NOLOHH_06710 0.32 -0.2 1,264,879 + wzzE NOLOHH_06710 0.32 -0.5 1,264,879 + wzzE NOLOHH_06710 0.32 -0.4 1,264,936 - wzzE NOLOHH_06710 0.37 -0.0 1,264,936 - wzzE NOLOHH_06710 0.37 +0.1 1,264,936 - wzzE NOLOHH_06710 0.37 +0.1 1,265,061 + wzzE NOLOHH_06710 0.49 +0.3 1,265,061 + wzzE NOLOHH_06710 0.49 +0.4 1,265,061 + wzzE NOLOHH_06710 0.49 +0.5 1,265,062 - wzzE NOLOHH_06710 0.49 +0.1 1,265,062 - wzzE NOLOHH_06710 0.49 +0.3 1,265,070 - wzzE NOLOHH_06710 0.50 +0.5 1,265,070 - wzzE NOLOHH_06710 0.50 +0.6 1,265,070 - wzzE NOLOHH_06710 0.50 -0.1 1,265,104 + wzzE NOLOHH_06710 0.53 -0.5 1,265,104 + wzzE NOLOHH_06710 0.53 +0.3 1,265,223 + wzzE NOLOHH_06710 0.65 -1.4 1,265,223 + wzzE NOLOHH_06710 0.65 -0.5 1,265,223 + wzzE NOLOHH_06710 0.65 -0.3 1,265,223 + wzzE NOLOHH_06710 0.65 -0.3 1,265,223 + wzzE NOLOHH_06710 0.65 +2.4 1,265,223 + wzzE NOLOHH_06710 0.65 -1.4 1,265,224 - wzzE NOLOHH_06710 0.65 +0.2 1,265,224 - wzzE NOLOHH_06710 0.65 +0.2 1,265,224 - wzzE NOLOHH_06710 0.65 +0.2 1,265,226 + wzzE NOLOHH_06710 0.65 -0.1 1,265,227 - wzzE NOLOHH_06710 0.65 +0.3 1,265,278 + wzzE NOLOHH_06710 0.70 -0.0 1,265,290 + wzzE NOLOHH_06710 0.71 -0.7 1,265,292 + wzzE NOLOHH_06710 0.71 -0.8 1,265,292 + wzzE NOLOHH_06710 0.71 -0.2 1,265,293 - wzzE NOLOHH_06710 0.71 -0.6 1,265,293 - wzzE NOLOHH_06710 0.71 +0.2 1,265,377 - wzzE NOLOHH_06710 0.79 -0.6 1,265,380 - wzzE NOLOHH_06710 0.80 +0.0 1,265,380 - wzzE NOLOHH_06710 0.80 +0.3 1,265,392 + wzzE NOLOHH_06710 0.81 -1.1 1,265,392 + wzzE NOLOHH_06710 0.81 -0.5 1,265,392 + wzzE NOLOHH_06710 0.81 -1.1 1,265,392 + wzzE NOLOHH_06710 0.81 -0.6 1,265,393 - wzzE NOLOHH_06710 0.81 +0.3 1,265,393 - wzzE NOLOHH_06710 0.81 +0.6 1,265,393 - wzzE NOLOHH_06710 0.81 +0.4 1,265,393 - wzzE NOLOHH_06710 0.81 +1.3 1,265,393 - wzzE NOLOHH_06710 0.81 -0.1 1,265,393 - wzzE NOLOHH_06710 0.81 -0.3 1,265,393 - wzzE NOLOHH_06710 0.81 -1.0 1,265,452 + wzzE NOLOHH_06710 0.86 +0.5 1,265,455 - wzzE NOLOHH_06710 0.87 -0.5 1,265,495 - -0.2 1,265,606 + -0.7 1,265,607 - -0.3 1,265,656 + -4.2 1,265,664 + -4.3 1,265,709 - -4.7 1,265,709 - -3.7 1,265,768 + wecA NOLOHH_06715 0.15 -2.6 1,265,841 + wecA NOLOHH_06715 0.21 -2.9 1,265,871 + wecA NOLOHH_06715 0.24 -5.5 1,265,872 - wecA NOLOHH_06715 0.24 -4.3 1,265,872 - wecA NOLOHH_06715 0.24 -4.6 1,265,872 - wecA NOLOHH_06715 0.24 -3.1 1,265,908 - wecA NOLOHH_06715 0.27 -3.7 1,265,921 + wecA NOLOHH_06715 0.29 -3.1 1,265,922 - wecA NOLOHH_06715 0.29 -5.2 1,265,922 - wecA NOLOHH_06715 0.29 -2.1 1,265,922 - wecA NOLOHH_06715 0.29 -3.4 1,265,925 + wecA NOLOHH_06715 0.29 -4.4 1,265,926 - wecA NOLOHH_06715 0.29 -3.7 1,265,937 + wecA NOLOHH_06715 0.30 -4.1 1,266,027 + wecA NOLOHH_06715 0.38 -4.3 1,266,049 - wecA NOLOHH_06715 0.40 -4.8 1,266,093 + wecA NOLOHH_06715 0.44 -5.1 1,266,113 + wecA NOLOHH_06715 0.46 -4.6 1,266,113 + wecA NOLOHH_06715 0.46 -3.7 1,266,113 + wecA NOLOHH_06715 0.46 -5.5 1,266,113 + wecA NOLOHH_06715 0.46 -4.5 1,266,113 + wecA NOLOHH_06715 0.46 -2.5 1,266,114 - wecA NOLOHH_06715 0.46 -3.9 1,266,114 - wecA NOLOHH_06715 0.46 -0.7 1,266,114 - wecA NOLOHH_06715 0.46 -5.5 1,266,114 - wecA NOLOHH_06715 0.46 -4.0 1,266,261 + wecA NOLOHH_06715 0.59 -4.7 1,266,283 + wecA NOLOHH_06715 0.61 -4.4 1,266,284 - wecA NOLOHH_06715 0.62 -3.5 1,266,296 + wecA NOLOHH_06715 0.63 -3.4 1,266,296 + wecA NOLOHH_06715 0.63 -3.9 1,266,336 + wecA NOLOHH_06715 0.66 -4.3 1,266,336 + wecA NOLOHH_06715 0.66 -6.1 1,266,336 + wecA NOLOHH_06715 0.66 -4.4 1,266,336 + wecA NOLOHH_06715 0.66 -5.3 1,266,336 + wecA NOLOHH_06715 0.66 -3.4 1,266,336 + wecA NOLOHH_06715 0.66 -4.0 1,266,337 - wecA NOLOHH_06715 0.66 -5.7 1,266,337 - wecA NOLOHH_06715 0.66 -4.3 1,266,337 - wecA NOLOHH_06715 0.66 -4.8 1,266,337 - wecA NOLOHH_06715 0.66 -4.9 1,266,337 - wecA NOLOHH_06715 0.66 -6.2 1,266,337 - wecA NOLOHH_06715 0.66 -5.5 1,266,337 - wecA NOLOHH_06715 0.66 -5.3 1,266,337 - wecA NOLOHH_06715 0.66 -2.4 1,266,338 + wecA NOLOHH_06715 0.66 -2.9 1,266,338 + wecA NOLOHH_06715 0.66 -2.1 1,266,339 - wecA NOLOHH_06715 0.66 -5.5 1,266,339 - wecA NOLOHH_06715 0.66 -2.3 1,266,339 - wecA NOLOHH_06715 0.66 -5.4 1,266,349 - wecA NOLOHH_06715 0.67 -4.0 1,266,356 + wecA NOLOHH_06715 0.68 -4.3 1,266,356 + wecA NOLOHH_06715 0.68 -5.0 1,266,357 - wecA NOLOHH_06715 0.68 -5.1 1,266,378 + wecA NOLOHH_06715 0.70 -3.9 1,266,378 + wecA NOLOHH_06715 0.70 -3.4 1,266,378 + wecA NOLOHH_06715 0.70 -3.7 1,266,378 + wecA NOLOHH_06715 0.70 -3.2 1,266,378 + wecA NOLOHH_06715 0.70 -4.9 1,266,378 + wecA NOLOHH_06715 0.70 -4.2 1,266,379 - wecA NOLOHH_06715 0.70 -6.3 1,266,379 - wecA NOLOHH_06715 0.70 -4.9 1,266,379 - wecA NOLOHH_06715 0.70 -3.9 1,266,379 - wecA NOLOHH_06715 0.70 -3.2 1,266,379 - wecA NOLOHH_06715 0.70 -4.9 1,266,400 + wecA NOLOHH_06715 0.72 -4.6 1,266,401 - wecA NOLOHH_06715 0.72 -5.4 1,266,426 + wecA NOLOHH_06715 0.74 -3.8 1,266,427 - wecA NOLOHH_06715 0.74 -5.4 1,266,483 - wecA NOLOHH_06715 0.80 -4.4 1,266,501 + wecA NOLOHH_06715 0.81 -2.0 1,266,502 - wecA NOLOHH_06715 0.81 -2.7 1,266,502 - wecA NOLOHH_06715 0.81 -3.2 1,266,502 - wecA NOLOHH_06715 0.81 -3.7 1,266,502 - wecA NOLOHH_06715 0.81 -3.8 1,266,503 + wecA NOLOHH_06715 0.81 -2.8 1,266,503 + wecA NOLOHH_06715 0.81 -3.9 1,266,503 + wecA NOLOHH_06715 0.81 -4.3 1,266,503 + wecA NOLOHH_06715 0.81 -5.0 1,266,504 - wecA NOLOHH_06715 0.81 -4.3 1,266,504 - wecA NOLOHH_06715 0.81 -3.9 1,266,504 - wecA NOLOHH_06715 0.81 -4.7 1,266,507 - wecA NOLOHH_06715 0.82 -2.7 1,266,507 - wecA NOLOHH_06715 0.82 -5.1 1,266,507 - wecA NOLOHH_06715 0.82 -3.8 1,266,542 + wecA NOLOHH_06715 0.85 -5.3 1,266,543 - wecA NOLOHH_06715 0.85 -4.2 1,266,568 + wecA NOLOHH_06715 0.87 -4.1 1,266,568 + wecA NOLOHH_06715 0.87 -2.1 1,266,568 + wecA NOLOHH_06715 0.87 -3.0 1,266,569 - wecA NOLOHH_06715 0.87 -4.7 1,266,569 - wecA NOLOHH_06715 0.87 -5.0 1,266,611 - -3.3 1,266,665 - -4.2 1,266,687 + -3.2 1,266,743 + NOLOHH_06720 0.11 -4.3 1,266,744 - NOLOHH_06720 0.11 -0.4 1,266,744 - NOLOHH_06720 0.11 -0.4 1,266,744 - NOLOHH_06720 0.11 +0.1 1,266,746 - NOLOHH_06720 0.12 +0.2 1,266,864 + NOLOHH_06720 0.66 +0.6 1,266,865 - NOLOHH_06720 0.66 +0.3 1,266,890 + NOLOHH_06720 0.78 +0.4 1,266,897 - NOLOHH_06720 0.81 -1.5 1,266,897 - NOLOHH_06720 0.81 +0.3 1,266,897 - NOLOHH_06720 0.81 -0.5 1,266,898 + NOLOHH_06720 0.81 -0.1 1,266,898 + NOLOHH_06720 0.81 +0.0 1,266,898 + NOLOHH_06720 0.81 -0.9 1,266,899 - NOLOHH_06720 0.82 -0.1 1,266,899 - NOLOHH_06720 0.82 -0.3 1,266,899 - NOLOHH_06720 0.82 +0.5 1,266,899 - NOLOHH_06720 0.82 -2.0 1,266,917 - +0.7 1,266,917 - -0.3 1,266,917 - +0.1 1,266,938 + -0.4 1,266,938 + -0.9 1,266,949 + +0.9
Or see this region's nucleotide sequence