Experiment: D-Mannose 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS18685 and ABI39_RS18690 are separated by 66 nucleotides ABI39_RS18690 and ABI39_RS18695 are separated by 2 nucleotides ABI39_RS18695 and ABI39_RS18700 are separated by 187 nucleotides
ABI39_RS18685: ABI39_RS18685 - hypothetical protein, at 4,707,478 to 4,707,951
_RS18685
ABI39_RS18690: ABI39_RS18690 - SGNH/GDSL hydrolase family protein, at 4,708,018 to 4,708,542
_RS18690
ABI39_RS18695: ABI39_RS18695 - hypothetical protein, at 4,708,545 to 4,708,751
_RS18695
ABI39_RS18700: ABI39_RS18700 - hypothetical protein, at 4,708,939 to 4,710,840
_RS18700
Position (kb) 4708
4709 Strain fitness (log2 ratio) -1
0
1 at 4707.752 kb on + strand, within ABI39_RS18685 at 4707.755 kb on - strand, within ABI39_RS18685 at 4707.755 kb on - strand, within ABI39_RS18685 at 4707.791 kb on + strand, within ABI39_RS18685 at 4707.889 kb on + strand, within ABI39_RS18685 at 4707.893 kb on - strand, within ABI39_RS18685 at 4707.931 kb on - strand at 4707.946 kb on - strand at 4707.964 kb on - strand at 4707.980 kb on + strand at 4708.000 kb on - strand at 4708.004 kb on + strand at 4708.151 kb on - strand, within ABI39_RS18690 at 4708.157 kb on - strand, within ABI39_RS18690 at 4708.211 kb on - strand, within ABI39_RS18690 at 4708.268 kb on - strand, within ABI39_RS18690 at 4708.291 kb on - strand, within ABI39_RS18690 at 4708.310 kb on + strand, within ABI39_RS18690 at 4708.323 kb on - strand, within ABI39_RS18690 at 4708.356 kb on + strand, within ABI39_RS18690 at 4708.386 kb on - strand, within ABI39_RS18690 at 4708.449 kb on - strand, within ABI39_RS18690 at 4708.449 kb on - strand, within ABI39_RS18690 at 4708.494 kb on - strand at 4708.547 kb on - strand at 4708.626 kb on - strand, within ABI39_RS18695 at 4708.677 kb on + strand, within ABI39_RS18695 at 4708.708 kb on + strand, within ABI39_RS18695 at 4708.709 kb on - strand, within ABI39_RS18695 at 4708.805 kb on - strand at 4708.869 kb on - strand at 4708.877 kb on + strand at 4708.891 kb on + strand at 4708.891 kb on + strand at 4708.895 kb on + strand at 4708.969 kb on + strand at 4709.166 kb on - strand, within ABI39_RS18700 at 4709.171 kb on - strand, within ABI39_RS18700 at 4709.205 kb on + strand, within ABI39_RS18700 at 4709.207 kb on + strand, within ABI39_RS18700 at 4709.208 kb on - strand, within ABI39_RS18700 at 4709.212 kb on - strand, within ABI39_RS18700 at 4709.212 kb on - strand, within ABI39_RS18700 at 4709.272 kb on - strand, within ABI39_RS18700 at 4709.316 kb on - strand, within ABI39_RS18700 at 4709.378 kb on + strand, within ABI39_RS18700 at 4709.437 kb on + strand, within ABI39_RS18700 at 4709.470 kb on + strand, within ABI39_RS18700 at 4709.472 kb on + strand, within ABI39_RS18700 at 4709.472 kb on + strand, within ABI39_RS18700 at 4709.473 kb on - strand, within ABI39_RS18700 at 4709.473 kb on - strand, within ABI39_RS18700 at 4709.474 kb on + strand, within ABI39_RS18700 at 4709.511 kb on + strand, within ABI39_RS18700 at 4709.567 kb on - strand, within ABI39_RS18700 at 4709.655 kb on + strand, within ABI39_RS18700 at 4709.662 kb on + strand, within ABI39_RS18700 at 4709.686 kb on - strand, within ABI39_RS18700 at 4709.745 kb on + strand, within ABI39_RS18700
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose 2.5 mg/ml (C) remove 4,707,752 + ABI39_RS18685 0.58 +0.2 4,707,755 - ABI39_RS18685 0.58 -0.4 4,707,755 - ABI39_RS18685 0.58 +1.0 4,707,791 + ABI39_RS18685 0.66 -0.0 4,707,889 + ABI39_RS18685 0.87 +0.4 4,707,893 - ABI39_RS18685 0.88 -0.5 4,707,931 - -0.2 4,707,946 - +0.1 4,707,964 - +0.9 4,707,980 + +0.7 4,708,000 - -0.6 4,708,004 + -0.5 4,708,151 - ABI39_RS18690 0.25 +0.8 4,708,157 - ABI39_RS18690 0.26 +0.3 4,708,211 - ABI39_RS18690 0.37 +1.0 4,708,268 - ABI39_RS18690 0.48 +0.2 4,708,291 - ABI39_RS18690 0.52 -0.7 4,708,310 + ABI39_RS18690 0.56 -0.2 4,708,323 - ABI39_RS18690 0.58 -0.8 4,708,356 + ABI39_RS18690 0.64 +0.2 4,708,386 - ABI39_RS18690 0.70 +0.5 4,708,449 - ABI39_RS18690 0.82 +0.3 4,708,449 - ABI39_RS18690 0.82 -0.4 4,708,494 - -0.3 4,708,547 - +0.5 4,708,626 - ABI39_RS18695 0.39 +0.3 4,708,677 + ABI39_RS18695 0.64 +0.1 4,708,708 + ABI39_RS18695 0.79 -0.0 4,708,709 - ABI39_RS18695 0.79 -0.6 4,708,805 - +0.6 4,708,869 - +0.5 4,708,877 + -0.5 4,708,891 + -0.4 4,708,891 + -0.0 4,708,895 + +0.3 4,708,969 + -0.9 4,709,166 - ABI39_RS18700 0.12 +0.6 4,709,171 - ABI39_RS18700 0.12 +0.2 4,709,205 + ABI39_RS18700 0.14 -0.4 4,709,207 + ABI39_RS18700 0.14 +0.6 4,709,208 - ABI39_RS18700 0.14 +0.4 4,709,212 - ABI39_RS18700 0.14 +0.8 4,709,212 - ABI39_RS18700 0.14 -0.1 4,709,272 - ABI39_RS18700 0.18 +0.3 4,709,316 - ABI39_RS18700 0.20 -0.1 4,709,378 + ABI39_RS18700 0.23 +0.4 4,709,437 + ABI39_RS18700 0.26 +0.6 4,709,470 + ABI39_RS18700 0.28 +0.7 4,709,472 + ABI39_RS18700 0.28 +0.3 4,709,472 + ABI39_RS18700 0.28 +0.0 4,709,473 - ABI39_RS18700 0.28 +0.3 4,709,473 - ABI39_RS18700 0.28 +0.4 4,709,474 + ABI39_RS18700 0.28 +0.6 4,709,511 + ABI39_RS18700 0.30 -0.7 4,709,567 - ABI39_RS18700 0.33 +0.7 4,709,655 + ABI39_RS18700 0.38 +0.7 4,709,662 + ABI39_RS18700 0.38 +1.2 4,709,686 - ABI39_RS18700 0.39 +0.3 4,709,745 + ABI39_RS18700 0.42 -0.7
Or see this region's nucleotide sequence