Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS05585

Experiment: D-Mannose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose 2.5 mg/ml (C)
1,544,396	+		ABI39_RS05575	0.77	-0.6
1,544,429	-		ABI39_RS05575	0.79	+0.3
1,544,495	+		ABI39_RS05575	0.83	+1.1
1,544,584	+		ABI39_RS05575	0.87	+0.2
1,544,586	+		ABI39_RS05575	0.88	+0.9
1,544,663	+				+0.6
1,544,793	+				+1.2
1,544,794	-				+0.1
1,544,864	-				+0.4
1,544,867	+				+0.5
1,544,868	-				+0.4
1,544,923	-				+0.6
1,544,923	-				+0.2
1,544,927	-				-0.0
1,544,962	+				+0.4
1,545,039	+		ABI39_RS05580	0.10	+1.3
1,545,040	-		ABI39_RS05580	0.10	+0.6
1,545,043	+		ABI39_RS05580	0.11	+0.8
1,545,104	-		ABI39_RS05580	0.28	+1.2
1,545,231	+		ABI39_RS05580	0.62	+0.5
1,545,231	+		ABI39_RS05580	0.62	+1.0
1,545,238	+		ABI39_RS05580	0.64	+0.8
1,545,238	+		ABI39_RS05580	0.64	+0.0
1,545,249	-		ABI39_RS05580	0.67	+0.8
1,545,359	+				+0.2
1,545,448	-		ABI39_RS05585	0.12	+0.4
1,545,515	-		ABI39_RS05585	0.23	+0.9
1,545,515	-		ABI39_RS05585	0.23	+0.7
1,545,678	-		ABI39_RS05585	0.52	+0.0
1,545,691	-		ABI39_RS05585	0.54	+0.6
1,545,692	+		ABI39_RS05585	0.54	-0.4
1,545,738	-		ABI39_RS05585	0.62	+0.6
1,545,756	+		ABI39_RS05585	0.65	-0.1
1,545,817	+		ABI39_RS05585	0.76	-0.0
1,545,818	-		ABI39_RS05585	0.76	+0.0
1,545,873	+		ABI39_RS05585	0.86	+0.8
1,545,873	+		ABI39_RS05585	0.86	-0.1
1,545,878	+		ABI39_RS05585	0.87	+1.0
1,545,923	+				-0.1
1,545,962	+				-0.4
1,545,965	-				+0.4
1,545,965	-				+1.7
1,545,992	+				+0.0
1,546,002	+				+0.6
1,546,039	-				+0.7
1,546,056	+				+0.8
1,546,058	+				-0.1
1,546,059	-				+0.4
1,546,103	-		ABI39_RS05590	0.14	+0.8
1,546,143	+		ABI39_RS05590	0.18	+0.2
1,546,144	-		ABI39_RS05590	0.19	+1.0
1,546,229	+		ABI39_RS05590	0.28	-0.3
1,546,229	+		ABI39_RS05590	0.28	+0.1
1,546,230	-		ABI39_RS05590	0.29	+0.4
1,546,394	+		ABI39_RS05590	0.48	+0.2
1,546,421	-		ABI39_RS05590	0.51	+0.5
1,546,427	-		ABI39_RS05590	0.51	+0.4
1,546,427	-		ABI39_RS05590	0.51	+0.8
1,546,448	+		ABI39_RS05590	0.54	+0.3
1,546,502	-		ABI39_RS05590	0.60	+0.8
1,546,518	-		ABI39_RS05590	0.62	+0.7
1,546,552	+		ABI39_RS05590	0.66	-0.0
1,546,553	-		ABI39_RS05590	0.66	-0.0
1,546,639	+		ABI39_RS05590	0.76	+0.4
1,546,645	+		ABI39_RS05590	0.77	-0.6
1,546,649	-		ABI39_RS05590	0.77	+0.6
1,546,733	+		ABI39_RS05590	0.87	+0.6
1,546,755	-		ABI39_RS05590	0.90	-0.2
1,546,797	-				+0.0
1,546,797	-				+0.3
1,546,846	+				+0.9
1,546,885	+				+0.3
1,546,885	+				-0.0
1,546,885	+				+0.3
1,546,885	+				-0.1
1,546,886	-				+0.9