Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10310

Experiment: D-Glucose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose 2.5 mg/ml (C)
2,749,965	-		ABI39_RS10305	0.30	-0.6
2,750,006	+		ABI39_RS10305	0.34	+0.4
2,750,122	+		ABI39_RS10305	0.46	-0.5
2,750,122	+		ABI39_RS10305	0.46	+0.6
2,750,123	-		ABI39_RS10305	0.46	+0.7
2,750,187	+		ABI39_RS10305	0.52	+0.2
2,750,421	+		ABI39_RS10305	0.75	+1.2
2,750,422	-		ABI39_RS10305	0.75	-0.9
2,750,438	+		ABI39_RS10305	0.77	-0.9
2,750,514	+		ABI39_RS10305	0.84	-0.4
2,750,671	+				+0.3
2,750,715	+				+1.4
2,750,715	+				-0.2
2,750,722	-				+0.2
2,750,727	+				+0.4
2,750,735	+				+0.6
2,750,785	+				-1.3
2,750,786	-				+0.4
2,750,787	+				-0.5
2,750,918	-				+0.3
2,751,175	+				-0.1
2,751,176	-				+0.9
2,751,183	-				+0.4
2,751,218	+				+0.3
2,751,229	-				+0.6
2,751,303	+		ABI39_RS10310	0.11	-0.8
2,751,304	-		ABI39_RS10310	0.11	+0.4
2,751,324	+		ABI39_RS10310	0.12	-0.7
2,751,327	+		ABI39_RS10310	0.12	+0.9
2,751,340	-		ABI39_RS10310	0.13	-0.2
2,751,366	+		ABI39_RS10310	0.13	+0.7
2,751,390	+		ABI39_RS10310	0.14	+0.4
2,751,390	+		ABI39_RS10310	0.14	-0.4
2,751,394	-		ABI39_RS10310	0.14	+0.7
2,751,396	+		ABI39_RS10310	0.14	+0.2
2,751,453	+		ABI39_RS10310	0.16	+0.1
2,751,456	-		ABI39_RS10310	0.16	+0.7
2,751,780	-		ABI39_RS10310	0.26	+0.0
2,751,780	-		ABI39_RS10310	0.26	+0.4
2,751,815	-		ABI39_RS10310	0.27	+0.4
2,751,967	-		ABI39_RS10310	0.31	+0.8
2,752,061	-		ABI39_RS10310	0.34	-0.2
2,752,061	-		ABI39_RS10310	0.34	+0.7
2,752,078	-		ABI39_RS10310	0.35	-0.3
2,752,191	+		ABI39_RS10310	0.38	-0.2
2,752,261	-		ABI39_RS10310	0.40	+0.7
2,752,281	-		ABI39_RS10310	0.41	-0.3
2,752,303	-		ABI39_RS10310	0.42	+0.8
2,752,333	+		ABI39_RS10310	0.42	+0.8
2,752,357	+		ABI39_RS10310	0.43	-0.1
2,752,358	-		ABI39_RS10310	0.43	+0.8
2,752,361	+		ABI39_RS10310	0.43	+0.2
2,752,381	-		ABI39_RS10310	0.44	-0.3
2,752,450	-		ABI39_RS10310	0.46	-0.2
2,752,451	+		ABI39_RS10310	0.46	+0.5
2,752,452	-		ABI39_RS10310	0.46	-0.8
2,752,482	+		ABI39_RS10310	0.47	+0.2
2,752,482	+		ABI39_RS10310	0.47	+0.4
2,752,483	-		ABI39_RS10310	0.47	+0.5
2,752,506	+		ABI39_RS10310	0.48	-0.2
2,752,506	+		ABI39_RS10310	0.48	+0.3
2,752,507	-		ABI39_RS10310	0.48	+0.8
2,752,605	-		ABI39_RS10310	0.51	+0.9
2,752,636	-		ABI39_RS10310	0.52	+0.1
2,752,660	-		ABI39_RS10310	0.52	+2.6
2,752,665	+		ABI39_RS10310	0.52	+0.5
2,752,684	-		ABI39_RS10310	0.53	+0.4
2,752,692	-		ABI39_RS10310	0.53	-0.3
2,752,692	-		ABI39_RS10310	0.53	-0.6
2,752,732	-		ABI39_RS10310	0.54	+0.6
2,752,776	+		ABI39_RS10310	0.56	-0.5
2,752,802	+		ABI39_RS10310	0.57	+0.1
2,752,802	+		ABI39_RS10310	0.57	-1.3
2,752,862	-		ABI39_RS10310	0.58	+0.3
2,752,902	+		ABI39_RS10310	0.60	+0.4
2,752,971	-		ABI39_RS10310	0.62	+1.4
2,752,971	-		ABI39_RS10310	0.62	-0.4
2,752,995	-		ABI39_RS10310	0.62	-0.4
2,752,995	-		ABI39_RS10310	0.62	-0.4
2,753,008	-		ABI39_RS10310	0.63	+0.1
2,753,029	+		ABI39_RS10310	0.63	+0.6
2,753,030	-		ABI39_RS10310	0.63	+0.2
2,753,053	-		ABI39_RS10310	0.64	+0.5
2,753,094	-		ABI39_RS10310	0.65	-0.0
2,753,146	+		ABI39_RS10310	0.67	-0.0
2,753,292	-		ABI39_RS10310	0.71	+0.4
2,753,487	-		ABI39_RS10310	0.77	-1.1
2,753,527	-		ABI39_RS10310	0.78	-0.7
2,753,542	-		ABI39_RS10310	0.79	+0.2
2,753,548	-		ABI39_RS10310	0.79	-0.0
2,753,632	-		ABI39_RS10310	0.82	+0.3
2,753,735	+		ABI39_RS10310	0.85	-0.5
2,753,741	+		ABI39_RS10310	0.85	+0.0
2,753,741	+		ABI39_RS10310	0.85	+0.2
2,753,742	-		ABI39_RS10310	0.85	+0.0
2,753,752	+		ABI39_RS10310	0.85	+0.2
2,753,755	-		ABI39_RS10310	0.85	+0.6
2,753,814	-		ABI39_RS10310	0.87	-0.3
2,753,848	-		ABI39_RS10310	0.88	-0.4
2,754,051	-				+0.7
2,754,067	+				-0.1
2,754,207	+				-0.1
2,754,265	-				+1.4
2,754,307	+				+0.2
2,754,409	+				-0.3
2,754,424	+				-0.2
2,754,539	-		ABI39_RS10315	0.17	-0.2
2,754,539	-		ABI39_RS10315	0.17	-0.4
2,754,561	-		ABI39_RS10315	0.18	-0.2
2,754,593	+		ABI39_RS10315	0.20	+0.7
2,754,596	-		ABI39_RS10315	0.20	-0.0
2,754,664	-		ABI39_RS10315	0.24	+0.6
2,754,674	+		ABI39_RS10315	0.25	+0.5
2,754,734	-		ABI39_RS10315	0.28	-0.5
2,754,823	-		ABI39_RS10315	0.34	+0.3
2,754,932	+		ABI39_RS10315	0.40	-0.3
2,754,933	-		ABI39_RS10315	0.40	+0.7
2,754,940	+		ABI39_RS10315	0.40	+0.2
2,754,979	-		ABI39_RS10315	0.43	+0.4
2,754,984	-		ABI39_RS10315	0.43	+0.0
2,754,986	+		ABI39_RS10315	0.43	+0.6
2,754,987	-		ABI39_RS10315	0.43	+0.1
2,755,028	-		ABI39_RS10315	0.46	-0.4
2,755,103	-		ABI39_RS10315	0.50	+0.4
2,755,199	-		ABI39_RS10315	0.56	+0.8
2,755,199	-		ABI39_RS10315	0.56	+1.1
2,755,207	+		ABI39_RS10315	0.56	+0.3