Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS20680

Experiment: D-Glucose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose 2.5 mg/ml (C)
5,099,354	+		ABI39_RS20675	0.72	-0.7
5,099,360	-		ABI39_RS20675	0.72	-1.1
5,099,501	-		ABI39_RS20675	0.79	+0.8
5,099,548	+		ABI39_RS20675	0.82	-0.2
5,099,548	+		ABI39_RS20675	0.82	-0.5
5,099,691	-		ABI39_RS20675	0.89	-0.7
5,099,692	+		ABI39_RS20675	0.90	+0.1
5,099,779	+				-0.6
5,099,911	+				+0.1
5,100,138	+				-0.5
5,100,138	+				-0.6
5,100,159	+				-0.8
5,100,160	-				-0.7
5,100,324	-		ABI39_RS20680	0.14	-0.5
5,100,324	-		ABI39_RS20680	0.14	-0.6
5,100,410	+		ABI39_RS20680	0.19	-0.2
5,100,412	+		ABI39_RS20680	0.19	-0.3
5,100,413	-		ABI39_RS20680	0.19	-1.1
5,100,413	-		ABI39_RS20680	0.19	-1.7
5,100,497	-		ABI39_RS20680	0.24	-0.2
5,100,507	-		ABI39_RS20680	0.24	+0.4
5,100,660	+		ABI39_RS20680	0.33	-0.9
5,100,716	+		ABI39_RS20680	0.36	+0.5
5,100,716	+		ABI39_RS20680	0.36	-0.6
5,100,768	+		ABI39_RS20680	0.39	-0.1
5,100,769	-		ABI39_RS20680	0.39	-0.2
5,100,780	-		ABI39_RS20680	0.39	-0.6
5,100,852	+		ABI39_RS20680	0.43	-0.5
5,100,852	+		ABI39_RS20680	0.43	+1.5
5,100,908	-		ABI39_RS20680	0.46	-0.0
5,100,996	+		ABI39_RS20680	0.51	-1.0
5,101,050	+		ABI39_RS20680	0.54	-0.2
5,101,059	-		ABI39_RS20680	0.54	-1.0
5,101,292	+		ABI39_RS20680	0.67	-1.2
5,101,350	+		ABI39_RS20680	0.70	+0.1
5,101,382	+		ABI39_RS20680	0.72	-0.1
5,101,473	+		ABI39_RS20680	0.77	+0.2
5,101,533	-		ABI39_RS20680	0.80	-0.3
5,101,608	-		ABI39_RS20680	0.84	-0.5
5,101,788	-				+0.1
5,101,825	+				+0.0
5,101,848	+				-0.4
5,101,902	-				-0.5
5,101,911	-				+0.0
5,101,914	+				-0.8
5,101,915	-				-0.2
5,101,915	-				-0.9
5,101,940	+				+0.9
5,101,968	-				-0.5
5,102,101	+				-0.4
5,102,135	-				-0.4
5,102,256	-				+1.0
5,102,330	+				+0.3
5,102,330	+				+0.7
5,102,334	+				-0.1
5,102,461	-				-1.0
5,102,466	-				-0.0
5,102,580	-				+0.0
5,102,584	-				+0.8
5,102,600	+				+2.1
5,102,742	+		ABI39_RS20685	0.11	+0.1
5,102,750	-		ABI39_RS20685	0.11	+0.5
5,102,827	-		ABI39_RS20685	0.12	+0.1
5,102,890	+		ABI39_RS20685	0.14	+0.1