Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS19935

Experiment: D-Glucose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose 2.5 mg/ml (C)
4,927,002	+				-3.1
4,927,003	-				-3.4
4,927,060	-		ABI39_RS19930	0.10	-3.5
4,927,180	-		ABI39_RS19930	0.26	-2.4
4,927,285	+		ABI39_RS19930	0.40	-1.7
4,927,436	+		ABI39_RS19930	0.60	-3.5
4,927,437	-		ABI39_RS19930	0.60	-3.1
4,927,867	+				+0.6
4,927,881	+				+0.3
4,927,881	+				-1.7
4,927,881	+				-0.1
4,927,883	+				+1.0
4,927,950	+				-5.6
4,927,950	+				-3.7
4,927,990	+		ABI39_RS19935	0.14	-3.8
4,928,169	+		ABI39_RS19935	0.43	-5.9
4,928,239	-		ABI39_RS19935	0.55	-4.5
4,928,335	-		ABI39_RS19935	0.70	-4.1
4,928,372	-		ABI39_RS19935	0.76	-1.5
4,928,397	-		ABI39_RS19935	0.81	-3.4
4,928,415	+		ABI39_RS19935	0.83	-3.0
4,928,418	-		ABI39_RS19935	0.84	-3.4
4,928,418	-		ABI39_RS19935	0.84	-2.4
4,928,418	-		ABI39_RS19935	0.84	-2.2
4,928,430	+		ABI39_RS19935	0.86	-5.1
4,928,430	+		ABI39_RS19935	0.86	-2.5
4,928,431	-		ABI39_RS19935	0.86	-4.0
4,928,513	+				-0.0
4,928,544	-				-0.1
4,928,551	+				-0.5
4,928,553	+				+0.6
4,928,556	-				-0.2
4,928,572	+				+0.3
4,928,622	+		ABI39_RS19940	0.14	+0.2
4,928,748	-		ABI39_RS19940	0.30	+0.2
4,929,348	-				-2.6
4,929,348	-				-3.4
4,929,353	+				-0.6
4,929,357	-				-2.8
4,929,451	-				-3.8