Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS16620

Experiment: D-Glucose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose 2.5 mg/ml (C)
4,223,635	+		ABI39_RS16615	0.50	+0.2
4,223,720	+		ABI39_RS16615	0.55	-0.4
4,223,726	+		ABI39_RS16615	0.56	-0.2
4,223,727	-		ABI39_RS16615	0.56	+0.4
4,223,776	+		ABI39_RS16615	0.59	-0.8
4,223,791	-		ABI39_RS16615	0.60	-0.3
4,223,791	-		ABI39_RS16615	0.60	-0.1
4,223,943	+		ABI39_RS16615	0.69	-0.2
4,223,944	-		ABI39_RS16615	0.69	+0.5
4,223,946	-		ABI39_RS16615	0.69	+0.5
4,223,966	+		ABI39_RS16615	0.70	+0.8
4,223,970	-		ABI39_RS16615	0.71	-0.6
4,224,016	+		ABI39_RS16615	0.73	-0.7
4,224,048	-		ABI39_RS16615	0.75	-0.7
4,224,048	-		ABI39_RS16615	0.75	+0.0
4,224,075	+		ABI39_RS16615	0.77	+0.0
4,224,293	+				+1.0
4,224,456	-				+1.2
4,224,465	-				+0.3
4,224,470	+				-0.1
4,224,522	+				+0.4
4,224,522	+				+0.3
4,224,551	+				-0.2
4,224,552	-				-1.2
4,224,552	-				-0.1
4,224,609	-				-0.4
4,224,655	+				-0.2
4,224,834	+		ABI39_RS16620	0.40	-0.8
4,225,140	+				+0.1
4,225,224	-				+0.7
4,225,261	-		ABI39_RS16625	0.12	+0.7
4,225,270	-		ABI39_RS16625	0.13	+0.4
4,225,313	-		ABI39_RS16625	0.18	+0.5
4,225,396	-		ABI39_RS16625	0.28	+0.4
4,225,447	+		ABI39_RS16625	0.34	-0.2
4,225,496	+		ABI39_RS16625	0.40	+0.7
4,225,496	+		ABI39_RS16625	0.40	+0.4
4,225,511	+		ABI39_RS16625	0.42	+0.1
4,225,546	-		ABI39_RS16625	0.46	-0.2
4,225,546	-		ABI39_RS16625	0.46	+0.7
4,225,558	-		ABI39_RS16625	0.48	+0.3
4,225,558	-		ABI39_RS16625	0.48	-1.1
4,225,668	+		ABI39_RS16625	0.61	+0.6
4,225,669	-		ABI39_RS16625	0.62	-0.2
4,225,714	-		ABI39_RS16625	0.67	-0.7
4,225,755	+		ABI39_RS16625	0.72	+0.6
4,225,755	+		ABI39_RS16625	0.72	+0.5
4,225,755	+		ABI39_RS16625	0.72	+0.2
4,225,758	+		ABI39_RS16625	0.72	+0.9
4,225,857	+		ABI39_RS16625	0.85	+0.1
4,225,858	-		ABI39_RS16625	0.85	+0.0
4,225,884	+		ABI39_RS16625	0.88	+1.1
4,225,946	-				+0.8
4,225,949	+				+0.6
4,225,957	+				+0.0
4,226,092	-				-0.5
4,226,092	-				+1.0
4,226,093	+				-0.0
4,226,093	+				+0.5