Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS12720

Experiment: D-Glucose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose 2.5 mg/ml (C)
3,330,559	-		ABI39_RS12715	0.51	-3.6
3,330,559	-		ABI39_RS12715	0.51	-3.4
3,330,583	+		ABI39_RS12715	0.53	-2.9
3,330,626	+		ABI39_RS12715	0.55	-3.0
3,330,627	-		ABI39_RS12715	0.55	-1.9
3,330,719	+		ABI39_RS12715	0.60	-3.7
3,330,787	-		ABI39_RS12715	0.64	-2.1
3,330,795	-		ABI39_RS12715	0.65	-3.0
3,330,815	-		ABI39_RS12715	0.66	-2.0
3,330,817	-		ABI39_RS12715	0.66	-2.5
3,330,877	-		ABI39_RS12715	0.69	-4.4
3,330,877	-		ABI39_RS12715	0.69	-1.1
3,331,022	+		ABI39_RS12715	0.77	-2.4
3,331,035	-		ABI39_RS12715	0.78	-2.0
3,331,117	+		ABI39_RS12715	0.82	-3.9
3,331,206	+		ABI39_RS12715	0.87	-4.3
3,331,261	-				-4.1
3,331,290	+				-2.6
3,331,390	-				-4.1
3,331,395	-				-3.6
3,331,395	-				-2.3
3,331,627	+				-3.4
3,331,636	+				-3.3
3,331,637	-				-5.0
3,331,651	-				-3.0
3,331,652	+				-2.8
3,331,660	+				-2.1
3,331,666	+				-4.2
3,331,680	+				-3.0
3,331,680	+				-3.1
3,331,810	+		ABI39_RS12720	0.16	-3.2
3,331,956	+		ABI39_RS12720	0.25	-3.4
3,331,982	+		ABI39_RS12720	0.26	-3.6
3,331,987	-		ABI39_RS12720	0.27	-2.0
3,331,987	-		ABI39_RS12720	0.27	-1.7
3,331,991	-		ABI39_RS12720	0.27	-3.1
3,332,057	+		ABI39_RS12720	0.31	-2.2
3,332,091	-		ABI39_RS12720	0.33	-1.7
3,332,224	+		ABI39_RS12720	0.41	-4.2
3,332,255	-		ABI39_RS12720	0.42	-2.1
3,332,296	-		ABI39_RS12720	0.45	-2.9
3,332,311	-		ABI39_RS12720	0.46	-1.4
3,332,314	+		ABI39_RS12720	0.46	-1.8
3,332,315	-		ABI39_RS12720	0.46	-3.6
3,332,315	-		ABI39_RS12720	0.46	-2.6
3,332,417	+		ABI39_RS12720	0.52	-3.2
3,332,417	+		ABI39_RS12720	0.52	-3.9
3,332,418	-		ABI39_RS12720	0.52	-2.2
3,332,470	+		ABI39_RS12720	0.55	-3.2
3,332,514	-		ABI39_RS12720	0.58	-3.3
3,332,600	+		ABI39_RS12720	0.63	-2.3
3,332,716	-		ABI39_RS12720	0.70	-2.9
3,332,753	+		ABI39_RS12720	0.72	-1.6
3,332,758	+		ABI39_RS12720	0.72	-2.6
3,332,758	+		ABI39_RS12720	0.72	-4.1
3,332,863	-		ABI39_RS12720	0.78	-2.7
3,332,911	+		ABI39_RS12720	0.81	-1.7
3,332,912	-		ABI39_RS12720	0.81	-2.6
3,332,989	+		ABI39_RS12720	0.86	-3.9
3,332,990	-		ABI39_RS12720	0.86	-2.4
3,332,990	-		ABI39_RS12720	0.86	-4.4
3,333,016	+		ABI39_RS12720	0.87	-4.3
3,333,039	-		ABI39_RS12720	0.89	-3.6
3,333,039	-		ABI39_RS12720	0.89	-2.3
3,333,162	+				-2.5
3,333,163	-				-2.4
3,333,257	-				-2.7
3,333,260	+				-2.3
3,333,384	-		ABI39_RS12725	0.25	-3.0
3,333,384	-		ABI39_RS12725	0.25	-2.4
3,333,392	+		ABI39_RS12725	0.27	-2.0
3,333,455	-		ABI39_RS12725	0.38	-1.6
3,333,475	-		ABI39_RS12725	0.42	-2.8
3,333,479	+		ABI39_RS12725	0.43	+0.3
3,333,486	-		ABI39_RS12725	0.44	-2.2
3,333,516	+		ABI39_RS12725	0.49	-1.3
3,333,516	+		ABI39_RS12725	0.49	-1.1
3,333,811	+				-0.9
3,333,825	-				-2.5
3,333,967	+		ABI39_RS12730	0.23	-0.1
3,333,975	+		ABI39_RS12730	0.24	+0.7
3,333,976	-		ABI39_RS12730	0.24	-1.1
3,333,993	+		ABI39_RS12730	0.26	+0.9
3,334,059	-		ABI39_RS12730	0.35	-4.0
3,334,070	-		ABI39_RS12730	0.37	-3.6
3,334,205	+		ABI39_RS12730	0.55	-0.3
3,334,206	-		ABI39_RS12730	0.55	-2.0