Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS12665

Experiment: D-Glucose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose 2.5 mg/ml (C)
3,319,382	+				-0.5
3,319,404	-				-0.8
3,319,497	-		ABI39_RS12660	0.17	-0.1
3,319,586	+		ABI39_RS12660	0.26	+0.6
3,319,616	+		ABI39_RS12660	0.29	-0.2
3,319,686	+		ABI39_RS12660	0.36	+0.0
3,319,750	-		ABI39_RS12660	0.43	-1.0
3,319,780	+		ABI39_RS12660	0.46	-0.7
3,319,783	+		ABI39_RS12660	0.47	+0.1
3,319,943	-		ABI39_RS12660	0.64	-0.5
3,319,943	-		ABI39_RS12660	0.64	+0.3
3,319,943	-		ABI39_RS12660	0.64	-0.2
3,319,951	+		ABI39_RS12660	0.64	-0.2
3,319,952	-		ABI39_RS12660	0.64	+0.5
3,319,952	-		ABI39_RS12660	0.64	+0.1
3,319,980	+		ABI39_RS12660	0.67	-0.2
3,319,994	-		ABI39_RS12660	0.69	-0.3
3,320,066	+		ABI39_RS12660	0.76	-0.3
3,320,066	+		ABI39_RS12660	0.76	+0.1
3,320,110	+		ABI39_RS12660	0.81	+0.0
3,320,139	+		ABI39_RS12660	0.84	-0.7
3,320,145	+		ABI39_RS12660	0.85	-1.0
3,320,147	+		ABI39_RS12660	0.85	-0.0
3,320,148	-		ABI39_RS12660	0.85	-0.6
3,320,210	+				+0.5
3,320,211	-				-0.0
3,320,234	-				-0.1
3,320,234	-				-0.5
3,320,310	-				-5.0
3,320,311	+				-3.0
3,320,490	+		ABI39_RS12665	0.26	-2.6
3,320,494	+		ABI39_RS12665	0.27	-1.3
3,320,494	+		ABI39_RS12665	0.27	-1.4
3,320,494	+		ABI39_RS12665	0.27	-4.9
3,320,495	-		ABI39_RS12665	0.27	-0.6
3,320,495	-		ABI39_RS12665	0.27	-1.7
3,320,495	-		ABI39_RS12665	0.27	-3.2
3,320,498	+		ABI39_RS12665	0.27	-3.0
3,320,736	+		ABI39_RS12665	0.59	-2.0
3,320,744	+		ABI39_RS12665	0.60	-1.8
3,320,855	+		ABI39_RS12665	0.75	-1.6
3,320,856	-		ABI39_RS12665	0.75	-4.5
3,320,858	-		ABI39_RS12665	0.76	-2.1
3,320,936	+		ABI39_RS12665	0.86	-3.1
3,320,940	+		ABI39_RS12665	0.87	-1.5
3,321,048	-				-5.0
3,321,052	+				-2.9
3,321,068	+				-0.5
3,321,089	+				-0.5
3,321,219	-		ABI39_RS12670	0.22	+0.5
3,321,248	-		ABI39_RS12670	0.26	+0.5
3,321,261	+		ABI39_RS12670	0.28	+0.5
3,321,261	+		ABI39_RS12670	0.28	-1.1
3,321,262	-		ABI39_RS12670	0.28	-0.3
3,321,262	-		ABI39_RS12670	0.28	+0.5
3,321,262	-		ABI39_RS12670	0.28	-1.6
3,321,262	-		ABI39_RS12670	0.28	-2.4
3,321,264	-		ABI39_RS12670	0.28	-0.1
3,321,264	-		ABI39_RS12670	0.28	+0.7
3,321,312	-		ABI39_RS12670	0.35	-1.1
3,321,460	+		ABI39_RS12670	0.55	-1.5
3,321,605	+		ABI39_RS12670	0.74	-0.5
3,321,606	-		ABI39_RS12670	0.75	-0.2
3,321,856	-				-0.1