Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS12560

Experiment: D-Glucose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose 2.5 mg/ml (C)
3,297,457	+		ABI39_RS12555	0.72	-0.0
3,297,464	+		ABI39_RS12555	0.73	+0.2
3,297,588	-		ABI39_RS12555	0.85	-0.5
3,297,603	+		ABI39_RS12555	0.86	+0.4
3,297,614	-		ABI39_RS12555	0.88	-0.3
3,297,619	+		ABI39_RS12555	0.88	-0.3
3,297,620	-		ABI39_RS12555	0.88	-0.1
3,297,633	+		ABI39_RS12555	0.89	-0.4
3,297,780	-				+0.0
3,297,783	-				-0.2
3,297,811	-				-1.9
3,297,845	-				-0.1
3,297,875	+				+0.2
3,297,877	+				-0.2
3,297,878	-				-0.1
3,297,880	-				+0.5
3,298,074	-				+0.4
3,298,077	+				+0.1
3,298,117	+				-0.4
3,298,176	+				+1.0
3,298,198	+				+0.1
3,298,230	+				+0.4
3,298,265	+				-0.9
3,298,288	+				-0.1
3,298,308	+				-1.0
3,298,312	-				-0.6
3,298,312	-				-0.8
3,298,354	+				-2.6
3,298,519	+		ABI39_RS12560	0.21	-1.3
3,298,587	+		ABI39_RS12560	0.27	-1.2
3,298,588	-		ABI39_RS12560	0.27	-1.7
3,298,588	-		ABI39_RS12560	0.27	-2.3
3,298,652	+		ABI39_RS12560	0.34	-3.6
3,298,672	+		ABI39_RS12560	0.36	-1.8
3,298,673	-		ABI39_RS12560	0.36	-1.3
3,298,677	-		ABI39_RS12560	0.36	-2.0
3,298,754	+		ABI39_RS12560	0.44	-1.1
3,298,776	+		ABI39_RS12560	0.46	-2.4
3,298,798	-		ABI39_RS12560	0.48	-1.3
3,298,964	-		ABI39_RS12560	0.65	+0.3
3,298,984	+		ABI39_RS12560	0.67	-1.6
3,298,985	-		ABI39_RS12560	0.67	-1.7
3,299,315	-				-0.9
3,299,320	+				-1.2
3,299,320	-				-1.0
3,299,402	-				-1.3
3,299,517	-		ABI39_RS12565	0.25	-2.0
3,299,585	-		ABI39_RS12565	0.35	-2.4
3,299,588	+		ABI39_RS12565	0.35	-1.6
3,299,741	+		ABI39_RS12565	0.57	-2.5
3,299,825	+		ABI39_RS12565	0.69	-2.3
3,299,989	+				-2.2
3,300,021	-				-2.5
3,300,034	-				-2.0
3,300,034	-				-1.8
3,300,040	+				-1.4
3,300,210	-				+0.1
3,300,261	-				-0.2
3,300,263	-				-0.2
3,300,301	+				+0.2