Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS04675

Experiment: D-Glucose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose 2.5 mg/ml (C)
1,311,062	-				+0.0
1,311,080	-				-0.6
1,311,083	+				-0.4
1,311,084	-				-0.5
1,311,087	+				-0.5
1,311,088	+				+0.1
1,311,166	+				-0.1
1,311,211	-		ABI39_RS04670	0.16	-0.4
1,311,313	-		ABI39_RS04670	0.30	-0.3
1,311,347	+		ABI39_RS04670	0.34	+0.3
1,311,434	+		ABI39_RS04670	0.46	+0.4
1,311,462	-		ABI39_RS04670	0.50	-0.1
1,311,524	+		ABI39_RS04670	0.58	-0.6
1,311,542	-		ABI39_RS04670	0.61	-0.0
1,311,584	+		ABI39_RS04670	0.67	+0.1
1,311,618	+		ABI39_RS04670	0.71	-0.4
1,311,732	-		ABI39_RS04670	0.87	+0.2
1,311,825	+				+0.1
1,311,826	-				-0.0
1,311,988	+				-0.4
1,311,989	-				+0.3
1,311,993	-				+0.3
1,311,993	-				-0.1
1,311,997	+				+0.2
1,312,002	-				+0.1
1,312,026	+				+0.4
1,312,075	+		ABI39_RS04675	0.11	-0.9
1,312,243	+		ABI39_RS04675	0.46	-0.3
1,312,485	+				+0.5
1,312,486	-				-0.3
1,312,489	+				-0.4
1,312,490	-				+0.2
1,312,516	+				+0.2
1,312,527	+				-0.6
1,312,587	-		ABI39_RS04680	0.19	-0.3
1,312,604	-		ABI39_RS04680	0.23	-0.0
1,312,641	-		ABI39_RS04680	0.30	-0.9
1,312,727	+		ABI39_RS04680	0.47	-0.3
1,312,826	-		ABI39_RS04680	0.66	-0.3
1,312,872	+		ABI39_RS04680	0.75	-0.2
1,313,290	-		ABI39_RS04685	0.30	-3.7
1,313,450	+		ABI39_RS04685	0.50	-2.8