Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS08010

Experiment: D-Glucosamine Hydrochloride 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride 2.5 mg/ml (C)
2,155,494	+		ABI39_RS08005	0.44	+0.9
2,155,494	+		ABI39_RS08005	0.44	-0.4
2,155,497	-		ABI39_RS08005	0.44	+0.5
2,155,596	-		ABI39_RS08005	0.51	-0.0
2,155,606	-		ABI39_RS08005	0.51	+0.3
2,155,613	+		ABI39_RS08005	0.52	-0.8
2,155,615	+		ABI39_RS08005	0.52	-0.3
2,155,640	-		ABI39_RS08005	0.54	+0.2
2,155,674	+		ABI39_RS08005	0.56	+0.1
2,155,675	-		ABI39_RS08005	0.56	-0.4
2,155,809	-		ABI39_RS08005	0.66	-0.1
2,155,850	-		ABI39_RS08005	0.69	-0.8
2,155,857	-		ABI39_RS08005	0.69	-0.6
2,155,888	+		ABI39_RS08005	0.71	-1.0
2,155,889	-		ABI39_RS08005	0.71	-0.5
2,155,903	-		ABI39_RS08005	0.72	+0.2
2,155,919	+		ABI39_RS08005	0.74	-0.1
2,155,919	+		ABI39_RS08005	0.74	-1.3
2,155,923	-		ABI39_RS08005	0.74	+0.1
2,155,964	+		ABI39_RS08005	0.77	+0.0
2,156,100	-		ABI39_RS08005	0.86	+0.1
2,156,181	-				+0.1
2,156,184	-				-1.3
2,156,187	-				+0.8
2,156,207	-				-1.1
2,156,288	-				+0.1
2,156,288	-				-0.4
2,156,292	-				-0.2
2,156,339	-				-0.2
2,156,433	+				+0.1
2,156,445	-				-0.5
2,156,456	+				-0.6
2,156,502	-				-0.1
2,156,605	-		ABI39_RS08010	0.15	+0.7
2,156,624	+		ABI39_RS08010	0.17	+0.5
2,156,624	+		ABI39_RS08010	0.17	-0.4
2,156,660	+		ABI39_RS08010	0.21	+0.0
2,156,666	-		ABI39_RS08010	0.22	-0.0
2,156,713	-		ABI39_RS08010	0.28	-0.3
2,156,765	-		ABI39_RS08010	0.34	+0.1
2,156,768	+		ABI39_RS08010	0.34	+0.9
2,156,851	-		ABI39_RS08010	0.44	+0.0
2,156,891	+		ABI39_RS08010	0.49	+1.0
2,156,895	+		ABI39_RS08010	0.49	-1.0
2,156,928	-		ABI39_RS08010	0.53	+0.1
2,157,078	+		ABI39_RS08010	0.71	-0.2
2,157,081	+		ABI39_RS08010	0.71	+0.1
2,157,184	+		ABI39_RS08010	0.84	+0.4
2,157,233	-		ABI39_RS08010	0.89	+0.2
2,157,233	-		ABI39_RS08010	0.89	+0.1
2,157,271	-				-0.2
2,157,319	+				-0.6
2,157,355	-				+0.3
2,157,355	-				-0.2
2,157,487	+		ABI39_RS08015	0.17	-0.5
2,157,529	-		ABI39_RS08015	0.22	-1.1
2,157,530	+		ABI39_RS08015	0.22	-0.2
2,157,793	+		ABI39_RS08015	0.52	-0.2
2,157,794	-		ABI39_RS08015	0.52	+0.4
2,157,834	-		ABI39_RS08015	0.56	-0.1
2,157,836	-		ABI39_RS08015	0.56	-0.1
2,157,856	-		ABI39_RS08015	0.59	+0.4
2,157,929	-		ABI39_RS08015	0.67	-0.1
2,157,929	-		ABI39_RS08015	0.67	-0.3
2,157,931	-		ABI39_RS08015	0.67	-1.2
2,157,952	+		ABI39_RS08015	0.69	+0.3
2,157,954	+		ABI39_RS08015	0.70	-1.1
2,158,053	+		ABI39_RS08015	0.81	-0.5
2,158,083	+		ABI39_RS08015	0.84	+0.1
2,158,150	-				-0.1
2,158,221	-				+0.0
2,158,249	-				+0.4