Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS08220

Experiment: D-Glucosamine Hydrochloride 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride 2.5 mg/ml (C)
2,194,618	+		ABI39_RS08215	0.48	-1.7
2,194,722	+		ABI39_RS08215	0.65	-0.7
2,194,724	+		ABI39_RS08215	0.65	-0.2
2,195,009	-				-0.2
2,195,062	+				+0.7
2,195,103	-				-0.1
2,195,143	+				-0.3
2,195,348	+				-0.4
2,195,484	+				-0.1
2,195,485	-				-0.9
2,195,810	-				-0.1
2,195,831	-				-0.1
2,195,836	-		ABI39_RS08220	0.10	-0.3
2,195,837	+		ABI39_RS08220	0.10	+0.1
2,195,838	-		ABI39_RS08220	0.10	-0.5
2,195,838	-		ABI39_RS08220	0.10	-0.1
2,195,857	+		ABI39_RS08220	0.11	+0.1
2,195,857	+		ABI39_RS08220	0.11	-1.0
2,195,858	-		ABI39_RS08220	0.11	+0.2
2,195,939	+		ABI39_RS08220	0.14	+0.1
2,195,941	+		ABI39_RS08220	0.15	+0.4
2,195,947	-		ABI39_RS08220	0.15	+0.1
2,196,050	+		ABI39_RS08220	0.19	-1.2
2,196,189	+		ABI39_RS08220	0.25	-0.2
2,196,223	-		ABI39_RS08220	0.27	-1.5
2,196,229	-		ABI39_RS08220	0.27	+0.2
2,196,276	-		ABI39_RS08220	0.29	-0.6
2,196,326	+		ABI39_RS08220	0.31	+0.1
2,196,366	-		ABI39_RS08220	0.33	-0.1
2,196,366	-		ABI39_RS08220	0.33	-0.1
2,196,496	-		ABI39_RS08220	0.38	+0.1
2,196,496	-		ABI39_RS08220	0.38	+0.6
2,196,570	-		ABI39_RS08220	0.42	-1.8
2,196,603	+		ABI39_RS08220	0.43	+0.3
2,196,616	+		ABI39_RS08220	0.44	+0.4
2,196,617	-		ABI39_RS08220	0.44	-0.8
2,196,690	+		ABI39_RS08220	0.47	-0.8
2,196,696	+		ABI39_RS08220	0.47	+0.4
2,196,729	+		ABI39_RS08220	0.49	-1.6
2,196,802	-		ABI39_RS08220	0.52	+0.4
2,196,876	+		ABI39_RS08220	0.55	+1.8
2,196,909	+		ABI39_RS08220	0.56	+0.3
2,196,954	+		ABI39_RS08220	0.58	-0.5
2,197,007	+		ABI39_RS08220	0.61	-0.5
2,197,049	+		ABI39_RS08220	0.62	-0.7
2,197,081	+		ABI39_RS08220	0.64	+0.1
2,197,082	-		ABI39_RS08220	0.64	-0.0
2,197,178	+		ABI39_RS08220	0.68	+0.3
2,197,417	+		ABI39_RS08220	0.78	-0.2
2,197,500	-		ABI39_RS08220	0.82	-0.3
2,197,506	+		ABI39_RS08220	0.82	+0.1
2,197,653	+		ABI39_RS08220	0.88	+0.1
2,197,668	+		ABI39_RS08220	0.89	-2.2
2,197,876	-				-0.4
2,197,929	+				-0.9
2,197,950	-				+0.3
2,197,952	-				-1.0
2,198,212	+		ABI39_RS08225	0.14	+0.5
2,198,313	+		ABI39_RS08225	0.19	+0.1
2,198,428	+		ABI39_RS08225	0.25	+0.1
2,198,638	-		ABI39_RS08225	0.36	+0.2
2,198,678	-		ABI39_RS08225	0.38	-0.6
2,198,678	-		ABI39_RS08225	0.38	+0.4
2,198,711	-		ABI39_RS08225	0.40	+0.3
2,198,802	+		ABI39_RS08225	0.45	-0.9
2,198,867	-		ABI39_RS08225	0.48	+0.3