Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS06810

Experiment: D-Galactose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galactose 2.5 mg/ml (C)
1,888,056	+		ABI39_RS06800	0.68	+0.8
1,888,057	-		ABI39_RS06800	0.68	-0.4
1,888,076	+		ABI39_RS06800	0.69	+0.3
1,888,078	+		ABI39_RS06800	0.69	+0.2
1,888,078	+		ABI39_RS06800	0.69	-0.0
1,888,078	+		ABI39_RS06800	0.69	+0.0
1,888,078	+		ABI39_RS06800	0.69	+0.1
1,888,079	-		ABI39_RS06800	0.69	+0.4
1,888,079	-		ABI39_RS06800	0.69	-0.0
1,888,079	-		ABI39_RS06800	0.69	+0.3
1,888,079	-		ABI39_RS06800	0.69	+0.2
1,888,316	+		ABI39_RS06800	0.79	+0.2
1,888,317	-		ABI39_RS06800	0.79	+0.4
1,888,485	-		ABI39_RS06800	0.87	-0.2
1,888,485	-		ABI39_RS06800	0.87	-0.2
1,888,487	-		ABI39_RS06800	0.87	-0.3
1,888,581	+				+0.2
1,888,581	+				+0.6
1,888,652	+				+0.2
1,888,679	-				-0.0
1,888,725	+				+0.2
1,888,728	-				+1.1
1,888,869	-		ABI39_RS06805	0.30	+0.4
1,888,910	+		ABI39_RS06805	0.48	+0.3
1,888,933	+		ABI39_RS06805	0.59	+0.4
1,889,012	+				+0.1
1,889,061	+				+0.4
1,889,070	+				+0.3
1,889,154	-				+0.6
1,889,185	-				-0.0
1,889,242	+		ABI39_RS06810	0.11	+0.1
1,889,242	+		ABI39_RS06810	0.11	-0.1
1,889,294	-		ABI39_RS06810	0.13	-1.0
1,889,493	+		ABI39_RS06810	0.23	+0.2
1,889,679	+		ABI39_RS06810	0.32	+0.4
1,889,754	+		ABI39_RS06810	0.36	+0.4
1,889,864	+		ABI39_RS06810	0.42	+0.2
1,889,978	+		ABI39_RS06810	0.47	-0.5
1,889,990	-		ABI39_RS06810	0.48	+0.3
1,890,056	+		ABI39_RS06810	0.51	+0.1
1,890,088	+		ABI39_RS06810	0.53	+0.3
1,890,121	+		ABI39_RS06810	0.54	-0.0
1,890,133	+		ABI39_RS06810	0.55	+0.4
1,890,146	+		ABI39_RS06810	0.56	-0.1
1,890,152	+		ABI39_RS06810	0.56	+0.5
1,890,298	+		ABI39_RS06810	0.63	+0.2
1,890,298	+		ABI39_RS06810	0.63	+0.3
1,890,463	+		ABI39_RS06810	0.72	+0.3
1,890,512	+		ABI39_RS06810	0.74	+0.3
1,890,512	+		ABI39_RS06810	0.74	+0.1
1,890,512	+		ABI39_RS06810	0.74	+0.5
1,890,614	+		ABI39_RS06810	0.79	-0.1
1,890,625	+		ABI39_RS06810	0.80	+0.6
1,890,625	+		ABI39_RS06810	0.80	+0.2
1,890,853	-				-0.1
1,890,957	-				-1.4
1,890,974	-				+0.1
1,890,987	-				+0.6
1,890,989	+				+0.4
1,891,022	+				+0.3
1,891,183	-				+0.6
1,891,189	+				+0.6
1,891,210	-		ABI39_RS06815	0.11	+0.7
1,891,241	+		ABI39_RS06815	0.13	+0.3
1,891,251	+		ABI39_RS06815	0.13	+0.2
1,891,252	-		ABI39_RS06815	0.14	+0.5
1,891,252	-		ABI39_RS06815	0.14	+0.4
1,891,257	+		ABI39_RS06815	0.14	+0.2
1,891,257	+		ABI39_RS06815	0.14	+0.5
1,891,318	-		ABI39_RS06815	0.18	+0.3
1,891,343	+		ABI39_RS06815	0.19	+0.8
1,891,526	+		ABI39_RS06815	0.31	+1.1
1,891,706	+		ABI39_RS06815	0.42	+0.3
1,891,838	-		ABI39_RS06815	0.50	+0.1
1,891,856	+		ABI39_RS06815	0.52	+0.4
1,891,856	+		ABI39_RS06815	0.52	+0.0
1,891,944	+		ABI39_RS06815	0.57	+0.4
1,892,030	-		ABI39_RS06815	0.63	-0.3