Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS19925

Experiment: D-Fructose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose 2.5 mg/ml (C)
4,925,254	-		ABI39_RS19915	0.57	-2.0
4,925,254	-		ABI39_RS19915	0.57	-1.7
4,925,282	-		ABI39_RS19915	0.60	-1.7
4,925,282	-		ABI39_RS19915	0.60	-1.1
4,925,339	+		ABI39_RS19915	0.67	+0.7
4,925,340	-		ABI39_RS19915	0.67	-2.0
4,925,432	-		ABI39_RS19915	0.78	-1.0
4,925,432	-		ABI39_RS19915	0.78	-0.8
4,925,461	-		ABI39_RS19915	0.81	-2.1
4,925,477	+		ABI39_RS19915	0.83	-1.3
4,925,516	+		ABI39_RS19915	0.88	-0.9
4,925,661	+				-1.8
4,925,674	-				-1.6
4,925,725	+		ABI39_RS19920	0.17	-3.2
4,925,846	+		ABI39_RS19920	0.38	-0.0
4,925,847	-		ABI39_RS19920	0.38	-2.9
4,925,996	-		ABI39_RS19920	0.63	-3.4
4,926,046	+		ABI39_RS19920	0.72	-1.9
4,926,051	-		ABI39_RS19920	0.73	-3.7
4,926,058	-		ABI39_RS19920	0.74	-3.3
4,926,098	+		ABI39_RS19920	0.81	-2.8
4,926,099	-		ABI39_RS19920	0.81	-3.1
4,926,219	-				-3.0
4,926,223	+				+0.3
4,926,224	-				-3.3
4,926,225	+				-0.2
4,926,227	+				+0.7
4,926,229	+				+0.1
4,926,230	-				-0.9
4,926,233	-				-4.0
4,926,258	+				-3.0
4,926,264	+				-3.0
4,926,265	-				-3.0
4,926,339	-		ABI39_RS19925	0.12	-3.6
4,926,523	-		ABI39_RS19925	0.37	-2.5
4,926,724	+		ABI39_RS19925	0.65	-3.5
4,926,802	-		ABI39_RS19925	0.76	-3.0
4,926,858	+		ABI39_RS19925	0.84	-5.7
4,926,868	-		ABI39_RS19925	0.85	-1.1
4,927,002	+				-2.7
4,927,003	-				-3.4
4,927,060	-		ABI39_RS19930	0.10	-2.9
4,927,180	-		ABI39_RS19930	0.26	-2.8
4,927,285	+		ABI39_RS19930	0.40	-2.9
4,927,436	+		ABI39_RS19930	0.60	-5.5
4,927,437	-		ABI39_RS19930	0.60	-2.5
4,927,867	+				-0.1
4,927,881	+				+0.3
4,927,881	+				-0.4
4,927,881	+				-0.7
4,927,883	+				+0.2
4,927,950	+				-3.3
4,927,950	+				-2.5