Experiment: D-Fructose 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS17775 and ABI39_RS17780 are separated by 37 nucleotides ABI39_RS17780 and ABI39_RS17785 are separated by 113 nucleotides ABI39_RS17785 and ABI39_RS17790 are separated by 12 nucleotides ABI39_RS17790 and ABI39_RS17795 are separated by 218 nucleotides
ABI39_RS17775: ABI39_RS17775 - 2-iminoacetate synthase ThiH, at 4,486,042 to 4,487,172
_RS17775
ABI39_RS17780: ABI39_RS17780 - HesA/MoeB/ThiF family protein, at 4,487,210 to 4,487,941
_RS17780
ABI39_RS17785: ABI39_RS17785 - glutathionylspermidine synthase family protein, at 4,488,055 to 4,489,179
_RS17785
ABI39_RS17790: ABI39_RS17790 - hypothetical protein, at 4,489,192 to 4,489,545
_RS17790
ABI39_RS17795: ABI39_RS17795 - thiamine phosphate synthase, at 4,489,764 to 4,490,372
_RS17795
Position (kb) 4488
4489
4490 Strain fitness (log2 ratio) -1
0
1 at 4487.073 kb on + strand at 4487.174 kb on + strand at 4487.174 kb on + strand at 4487.174 kb on + strand at 4487.175 kb on - strand at 4487.214 kb on + strand at 4487.329 kb on + strand, within ABI39_RS17780 at 4487.330 kb on - strand, within ABI39_RS17780 at 4487.417 kb on - strand, within ABI39_RS17780 at 4487.421 kb on + strand, within ABI39_RS17780 at 4487.422 kb on - strand, within ABI39_RS17780 at 4487.453 kb on + strand, within ABI39_RS17780 at 4487.599 kb on + strand, within ABI39_RS17780 at 4487.669 kb on + strand, within ABI39_RS17780 at 4487.670 kb on - strand, within ABI39_RS17780 at 4487.673 kb on + strand, within ABI39_RS17780 at 4487.674 kb on - strand, within ABI39_RS17780 at 4487.706 kb on + strand, within ABI39_RS17780 at 4487.824 kb on - strand, within ABI39_RS17780 at 4487.987 kb on - strand at 4488.067 kb on - strand at 4488.067 kb on - strand at 4488.067 kb on - strand at 4488.182 kb on + strand, within ABI39_RS17785 at 4488.212 kb on - strand, within ABI39_RS17785 at 4488.212 kb on - strand, within ABI39_RS17785 at 4488.215 kb on + strand, within ABI39_RS17785 at 4488.216 kb on - strand, within ABI39_RS17785 at 4488.216 kb on - strand, within ABI39_RS17785 at 4488.252 kb on + strand, within ABI39_RS17785 at 4488.253 kb on - strand, within ABI39_RS17785 at 4488.253 kb on - strand, within ABI39_RS17785 at 4488.374 kb on + strand, within ABI39_RS17785 at 4488.399 kb on - strand, within ABI39_RS17785 at 4488.520 kb on - strand, within ABI39_RS17785 at 4488.588 kb on + strand, within ABI39_RS17785 at 4488.588 kb on + strand, within ABI39_RS17785 at 4488.589 kb on - strand, within ABI39_RS17785 at 4488.847 kb on + strand, within ABI39_RS17785 at 4488.874 kb on + strand, within ABI39_RS17785 at 4488.876 kb on + strand, within ABI39_RS17785 at 4488.902 kb on - strand, within ABI39_RS17785 at 4489.346 kb on + strand, within ABI39_RS17790 at 4489.552 kb on - strand at 4489.568 kb on + strand at 4489.598 kb on - strand at 4489.666 kb on - strand at 4489.778 kb on - strand at 4489.795 kb on - strand at 4489.848 kb on - strand, within ABI39_RS17795 at 4489.880 kb on + strand, within ABI39_RS17795 at 4490.022 kb on + strand, within ABI39_RS17795 at 4490.117 kb on + strand, within ABI39_RS17795 at 4490.121 kb on - strand, within ABI39_RS17795
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose 2.5 mg/ml (C) remove 4,487,073 + -0.2 4,487,174 + +0.1 4,487,174 + -0.3 4,487,174 + -0.1 4,487,175 - -0.2 4,487,214 + +0.9 4,487,329 + ABI39_RS17780 0.16 +0.6 4,487,330 - ABI39_RS17780 0.16 -0.4 4,487,417 - ABI39_RS17780 0.28 +0.2 4,487,421 + ABI39_RS17780 0.29 +0.4 4,487,422 - ABI39_RS17780 0.29 +0.3 4,487,453 + ABI39_RS17780 0.33 +0.5 4,487,599 + ABI39_RS17780 0.53 -0.1 4,487,669 + ABI39_RS17780 0.63 +0.3 4,487,670 - ABI39_RS17780 0.63 -0.2 4,487,673 + ABI39_RS17780 0.63 -0.7 4,487,674 - ABI39_RS17780 0.63 -1.1 4,487,706 + ABI39_RS17780 0.68 +0.5 4,487,824 - ABI39_RS17780 0.84 +0.5 4,487,987 - -0.4 4,488,067 - -0.3 4,488,067 - +0.8 4,488,067 - -0.9 4,488,182 + ABI39_RS17785 0.11 +0.4 4,488,212 - ABI39_RS17785 0.14 -0.0 4,488,212 - ABI39_RS17785 0.14 -0.6 4,488,215 + ABI39_RS17785 0.14 -0.9 4,488,216 - ABI39_RS17785 0.14 -0.3 4,488,216 - ABI39_RS17785 0.14 +0.9 4,488,252 + ABI39_RS17785 0.18 +0.1 4,488,253 - ABI39_RS17785 0.18 -0.1 4,488,253 - ABI39_RS17785 0.18 -0.1 4,488,374 + ABI39_RS17785 0.28 +0.3 4,488,399 - ABI39_RS17785 0.31 -0.8 4,488,520 - ABI39_RS17785 0.41 +0.6 4,488,588 + ABI39_RS17785 0.47 -0.4 4,488,588 + ABI39_RS17785 0.47 -0.6 4,488,589 - ABI39_RS17785 0.47 +0.1 4,488,847 + ABI39_RS17785 0.70 +0.0 4,488,874 + ABI39_RS17785 0.73 -0.5 4,488,876 + ABI39_RS17785 0.73 -0.6 4,488,902 - ABI39_RS17785 0.75 -1.0 4,489,346 + ABI39_RS17790 0.44 +0.7 4,489,552 - -0.4 4,489,568 + -0.1 4,489,598 - -0.1 4,489,666 - -1.3 4,489,778 - +0.9 4,489,795 - -0.1 4,489,848 - ABI39_RS17795 0.14 +0.2 4,489,880 + ABI39_RS17795 0.19 -0.5 4,490,022 + ABI39_RS17795 0.42 -0.0 4,490,117 + ABI39_RS17795 0.58 +1.1 4,490,121 - ABI39_RS17795 0.59 -1.2
Or see this region's nucleotide sequence