Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS17315

Experiment: D-Fructose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose 2.5 mg/ml (C)
4,375,620	+		ABI39_RS17310	0.18	+0.2
4,375,620	+		ABI39_RS17310	0.18	-0.1
4,375,637	+		ABI39_RS17310	0.19	+0.3
4,375,642	-		ABI39_RS17310	0.20	-0.1
4,375,695	+		ABI39_RS17310	0.24	+0.8
4,375,701	-		ABI39_RS17310	0.25	-0.8
4,375,713	+		ABI39_RS17310	0.26	-0.4
4,375,799	+		ABI39_RS17310	0.33	+2.5
4,375,800	-		ABI39_RS17310	0.34	-0.2
4,375,807	-		ABI39_RS17310	0.34	+0.2
4,375,868	+		ABI39_RS17310	0.39	-0.5
4,375,868	+		ABI39_RS17310	0.39	-0.5
4,375,871	+		ABI39_RS17310	0.40	+0.8
4,375,921	-		ABI39_RS17310	0.44	-0.0
4,375,926	-		ABI39_RS17310	0.44	-0.3
4,375,926	-		ABI39_RS17310	0.44	+0.8
4,375,926	-		ABI39_RS17310	0.44	+1.0
4,376,060	-		ABI39_RS17310	0.56	-0.0
4,376,062	-		ABI39_RS17310	0.56	-0.8
4,376,062	-		ABI39_RS17310	0.56	-1.0
4,376,104	-		ABI39_RS17310	0.60	-0.5
4,376,124	+		ABI39_RS17310	0.62	+0.0
4,376,170	-		ABI39_RS17310	0.66	+0.5
4,376,182	+		ABI39_RS17310	0.67	+0.4
4,376,183	-		ABI39_RS17310	0.67	-1.6
4,376,183	-		ABI39_RS17310	0.67	-0.7
4,376,187	-		ABI39_RS17310	0.67	-0.5
4,376,188	+		ABI39_RS17310	0.67	-0.7
4,376,188	+		ABI39_RS17310	0.67	-0.4
4,376,189	-		ABI39_RS17310	0.67	-0.8
4,376,300	+		ABI39_RS17310	0.77	-0.5
4,376,360	-		ABI39_RS17310	0.82	-1.0
4,376,616	-				-3.0
4,376,677	+				-3.1
4,376,769	-				-3.3
4,376,939	+		ABI39_RS17315	0.18	-3.0
4,376,939	+		ABI39_RS17315	0.18	-2.2
4,376,940	-		ABI39_RS17315	0.18	-4.1
4,376,946	-		ABI39_RS17315	0.19	-3.3
4,376,958	+		ABI39_RS17315	0.19	-2.1
4,376,990	+		ABI39_RS17315	0.21	-2.8
4,376,991	-		ABI39_RS17315	0.21	-1.6
4,377,114	+		ABI39_RS17315	0.27	-3.6
4,377,173	+		ABI39_RS17315	0.30	-2.6
4,377,174	-		ABI39_RS17315	0.30	-2.2
4,377,174	-		ABI39_RS17315	0.30	-3.8
4,377,177	+		ABI39_RS17315	0.30	-1.3
4,377,178	-		ABI39_RS17315	0.30	-5.0
4,377,188	-		ABI39_RS17315	0.31	-3.4
4,377,268	-		ABI39_RS17315	0.34	-2.5
4,377,268	-		ABI39_RS17315	0.34	-4.9
4,377,268	-		ABI39_RS17315	0.34	-3.3
4,377,543	-		ABI39_RS17315	0.48	-2.8
4,377,586	-		ABI39_RS17315	0.50	-3.8
4,377,586	-		ABI39_RS17315	0.50	-4.4
4,377,586	-		ABI39_RS17315	0.50	-4.1
4,377,743	-		ABI39_RS17315	0.58	-2.2
4,377,935	+		ABI39_RS17315	0.67	-2.7
4,377,972	+		ABI39_RS17315	0.69	-2.6
4,378,020	+		ABI39_RS17315	0.72	-1.3
4,378,021	-		ABI39_RS17315	0.72	-3.7
4,378,022	+		ABI39_RS17315	0.72	-2.4
4,378,059	+		ABI39_RS17315	0.73	-2.8
4,378,071	-		ABI39_RS17315	0.74	-4.0
4,378,203	+		ABI39_RS17315	0.81	-1.7
4,378,263	+		ABI39_RS17315	0.84	-3.4
4,378,310	-		ABI39_RS17315	0.86	-3.0
4,378,316	+		ABI39_RS17315	0.86	-1.0
4,378,317	-		ABI39_RS17315	0.86	-4.5
4,378,317	-		ABI39_RS17315	0.86	-2.0
4,378,317	-		ABI39_RS17315	0.86	-2.0
4,378,323	+		ABI39_RS17315	0.86	-2.3
4,378,587	+				-0.5
4,378,599	+				-0.8
4,378,606	-				-0.2
4,378,612	+				-0.4
4,378,616	+				-3.5
4,378,734	+		ABI39_RS17320	0.25	-2.3
4,378,814	-		ABI39_RS17320	0.43	-1.3
4,378,850	+		ABI39_RS17320	0.51	-2.5
4,378,867	+		ABI39_RS17320	0.55	-3.0
4,378,992	+		ABI39_RS17320	0.83	-2.8
4,379,069	+				-2.5
4,379,219	-		ABI39_RS17325	0.18	+0.0
4,379,221	+		ABI39_RS17325	0.18	-4.6
4,379,221	-		ABI39_RS17325	0.18	-0.1
4,379,221	-		ABI39_RS17325	0.18	-0.1
4,379,230	+		ABI39_RS17325	0.19	-4.4
4,379,380	-		ABI39_RS17325	0.42	-0.1
4,379,380	-		ABI39_RS17325	0.42	-0.0
4,379,526	-		ABI39_RS17325	0.64	-0.8
4,379,549	-		ABI39_RS17325	0.67	+0.0
4,379,582	-		ABI39_RS17325	0.72	-0.1
4,379,591	-		ABI39_RS17325	0.73	+0.2