Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS15265

Experiment: D-Fructose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose 2.5 mg/ml (C)
3,952,747	-		ABI39_RS15255	0.50	+0.0
3,952,816	-		ABI39_RS15255	0.81	-0.7
3,952,818	-		ABI39_RS15255	0.82	+1.0
3,952,822	-		ABI39_RS15255	0.84	-0.3
3,952,824	-		ABI39_RS15255	0.85	-1.4
3,952,827	+		ABI39_RS15255	0.86	-0.3
3,952,827	+		ABI39_RS15255	0.86	-0.6
3,952,842	+				-0.5
3,952,845	-				-0.2
3,952,856	-				-0.7
3,952,885	-				-0.2
3,952,895	+				-0.2
3,952,896	-				+1.6
3,952,898	+				-0.4
3,952,932	+				-0.4
3,952,985	+				+0.0
3,952,985	+				+0.0
3,953,018	+				+0.1
3,953,037	-				+1.3
3,953,128	-				+1.1
3,953,141	+				+0.3
3,953,143	+				+0.1
3,953,282	-				+0.6
3,953,486	+		ABI39_RS15260	0.25	-0.1
3,953,599	+		ABI39_RS15260	0.61	-0.8
3,953,664	+		ABI39_RS15260	0.83	+0.1
3,953,674	+		ABI39_RS15260	0.86	+0.1
3,953,674	+		ABI39_RS15260	0.86	+0.4
3,953,841	+		ABI39_RS15265	0.22	+1.2
3,953,846	-		ABI39_RS15265	0.23	-0.7
3,953,897	+		ABI39_RS15265	0.32	-0.7
3,953,901	-		ABI39_RS15265	0.33	+0.0
3,954,021	+		ABI39_RS15265	0.54	-0.4
3,954,126	+		ABI39_RS15265	0.72	-1.4
3,954,126	+		ABI39_RS15265	0.72	+0.0
3,954,127	-		ABI39_RS15265	0.73	-1.0
3,954,185	-		ABI39_RS15265	0.83	-0.2
3,954,360	-				-0.6
3,954,511	+		ABI39_RS15270	0.11	-0.1
3,954,542	-		ABI39_RS15270	0.13	-0.8
3,954,585	-		ABI39_RS15270	0.15	+0.5
3,954,657	+		ABI39_RS15270	0.19	+0.8
3,954,751	+		ABI39_RS15270	0.23	-0.4
3,954,752	-		ABI39_RS15270	0.23	+0.6
3,954,754	+		ABI39_RS15270	0.23	-0.1
3,954,815	-		ABI39_RS15270	0.26	-0.1
3,954,847	+		ABI39_RS15270	0.28	-1.0
3,954,912	+		ABI39_RS15270	0.31	-0.4
3,954,936	-		ABI39_RS15270	0.33	+0.3
3,955,078	-		ABI39_RS15270	0.40	+0.2
3,955,087	-		ABI39_RS15270	0.40	+0.1
3,955,124	+		ABI39_RS15270	0.42	+0.2
3,955,125	-		ABI39_RS15270	0.42	-0.1
3,955,166	-		ABI39_RS15270	0.44	-0.1
3,955,264	+		ABI39_RS15270	0.49	-0.6
3,955,268	+		ABI39_RS15270	0.49	+0.5
3,955,275	+		ABI39_RS15270	0.50	+0.4
3,955,275	+		ABI39_RS15270	0.50	+0.4