Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS12725

Experiment: D-Fructose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose 2.5 mg/ml (C)
3,332,255	-		ABI39_RS12720	0.42	-3.7
3,332,296	-		ABI39_RS12720	0.45	-0.1
3,332,311	-		ABI39_RS12720	0.46	-2.4
3,332,314	+		ABI39_RS12720	0.46	-1.8
3,332,315	-		ABI39_RS12720	0.46	-3.5
3,332,315	-		ABI39_RS12720	0.46	-1.6
3,332,417	+		ABI39_RS12720	0.52	-3.6
3,332,417	+		ABI39_RS12720	0.52	-2.9
3,332,418	-		ABI39_RS12720	0.52	-3.8
3,332,470	+		ABI39_RS12720	0.55	-2.2
3,332,514	-		ABI39_RS12720	0.58	-2.1
3,332,600	+		ABI39_RS12720	0.63	-1.9
3,332,716	-		ABI39_RS12720	0.70	-3.3
3,332,753	+		ABI39_RS12720	0.72	-3.9
3,332,758	+		ABI39_RS12720	0.72	-1.6
3,332,758	+		ABI39_RS12720	0.72	-1.5
3,332,863	-		ABI39_RS12720	0.78	-3.4
3,332,911	+		ABI39_RS12720	0.81	-2.3
3,332,912	-		ABI39_RS12720	0.81	-1.3
3,332,989	+		ABI39_RS12720	0.86	-2.9
3,332,990	-		ABI39_RS12720	0.86	-2.3
3,332,990	-		ABI39_RS12720	0.86	-2.6
3,333,016	+		ABI39_RS12720	0.87	-2.7
3,333,039	-		ABI39_RS12720	0.89	-3.0
3,333,039	-		ABI39_RS12720	0.89	-1.3
3,333,162	+				-2.9
3,333,163	-				-1.4
3,333,257	-				-3.3
3,333,260	+				-2.3
3,333,384	-		ABI39_RS12725	0.25	-2.0
3,333,384	-		ABI39_RS12725	0.25	-4.0
3,333,392	+		ABI39_RS12725	0.27	-2.0
3,333,455	-		ABI39_RS12725	0.38	-1.1
3,333,475	-		ABI39_RS12725	0.42	-1.8
3,333,479	+		ABI39_RS12725	0.43	-1.7
3,333,486	-		ABI39_RS12725	0.44	-1.7
3,333,516	+		ABI39_RS12725	0.49	-1.3
3,333,516	+		ABI39_RS12725	0.49	-2.0
3,333,811	+				-0.4
3,333,825	-				-2.5
3,333,967	+		ABI39_RS12730	0.23	+3.2
3,333,975	+		ABI39_RS12730	0.24	+0.3
3,333,976	-		ABI39_RS12730	0.24	-1.1
3,333,993	+		ABI39_RS12730	0.26	+1.0
3,334,059	-		ABI39_RS12730	0.35	-4.0
3,334,070	-		ABI39_RS12730	0.37	-2.0
3,334,205	+		ABI39_RS12730	0.55	+0.7
3,334,206	-		ABI39_RS12730	0.55	-1.0
3,334,293	-		ABI39_RS12730	0.67	-1.1
3,334,293	-		ABI39_RS12730	0.67	-2.8
3,334,328	-		ABI39_RS12730	0.71	-3.2
3,334,334	+		ABI39_RS12730	0.72	+0.4
3,334,338	+		ABI39_RS12730	0.73	+0.8
3,334,338	+		ABI39_RS12730	0.73	+0.3
3,334,338	+		ABI39_RS12730	0.73	-0.4
3,334,425	-		ABI39_RS12730	0.84	-2.0
3,334,427	+		ABI39_RS12730	0.85	+0.4
3,334,428	-		ABI39_RS12730	0.85	-0.4
3,334,483	-				-2.6
3,334,654	+				-1.7
3,334,655	-				-2.0