Experiment: Control_ECOR27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt efeO and efeU are separated by 57 nucleotides efeU and putP are separated by 665 nucleotides
NOLOHH_21485: efeO - iron uptake system protein EfeO, at 4,220,322 to 4,221,449
efeO
NOLOHH_21490: efeU - Ferrous iron permease EfeU, at 4,221,507 to 4,222,337
efeU
NOLOHH_21495: putP - sodium/proline symporter PutP, at 4,223,003 to 4,224,511
putP
Position (kb) 4221
4222
4223 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4220.731 kb on + strand, within efeO at 4220.731 kb on + strand, within efeO at 4220.732 kb on - strand, within efeO at 4220.732 kb on - strand, within efeO at 4220.840 kb on - strand, within efeO at 4220.967 kb on - strand, within efeO at 4220.979 kb on - strand, within efeO at 4220.979 kb on - strand, within efeO at 4221.026 kb on - strand, within efeO at 4221.033 kb on - strand, within efeO at 4221.033 kb on - strand, within efeO at 4221.033 kb on - strand, within efeO at 4221.035 kb on - strand, within efeO at 4221.035 kb on - strand, within efeO at 4221.035 kb on - strand, within efeO at 4221.035 kb on - strand, within efeO at 4221.061 kb on - strand, within efeO at 4221.282 kb on - strand, within efeO at 4221.384 kb on - strand at 4221.384 kb on - strand at 4221.459 kb on - strand at 4221.502 kb on - strand at 4221.502 kb on - strand at 4221.582 kb on - strand at 4221.777 kb on - strand, within efeU at 4221.777 kb on - strand, within efeU at 4222.259 kb on + strand at 4222.264 kb on + strand at 4222.316 kb on + strand at 4222.316 kb on + strand at 4222.316 kb on + strand at 4222.489 kb on + strand at 4222.489 kb on + strand at 4222.491 kb on + strand at 4222.491 kb on + strand at 4222.491 kb on + strand at 4222.570 kb on - strand at 4222.599 kb on + strand at 4222.599 kb on + strand at 4222.618 kb on - strand at 4222.618 kb on - strand at 4222.637 kb on - strand at 4222.672 kb on + strand at 4222.672 kb on + strand at 4222.691 kb on + strand at 4222.691 kb on + strand at 4222.932 kb on - strand at 4223.005 kb on - strand at 4223.005 kb on - strand at 4223.112 kb on - strand at 4223.305 kb on - strand, within putP at 4223.313 kb on - strand, within putP
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECOR27 remove 4,220,731 + efeO NOLOHH_21485 0.36 +1.8 4,220,731 + efeO NOLOHH_21485 0.36 +1.2 4,220,732 - efeO NOLOHH_21485 0.36 +0.3 4,220,732 - efeO NOLOHH_21485 0.36 +0.2 4,220,840 - efeO NOLOHH_21485 0.46 -0.4 4,220,967 - efeO NOLOHH_21485 0.57 +0.4 4,220,979 - efeO NOLOHH_21485 0.58 +1.6 4,220,979 - efeO NOLOHH_21485 0.58 +0.7 4,221,026 - efeO NOLOHH_21485 0.62 +0.9 4,221,033 - efeO NOLOHH_21485 0.63 +0.8 4,221,033 - efeO NOLOHH_21485 0.63 +0.5 4,221,033 - efeO NOLOHH_21485 0.63 +0.7 4,221,035 - efeO NOLOHH_21485 0.63 +1.2 4,221,035 - efeO NOLOHH_21485 0.63 -0.4 4,221,035 - efeO NOLOHH_21485 0.63 -0.4 4,221,035 - efeO NOLOHH_21485 0.63 +0.1 4,221,061 - efeO NOLOHH_21485 0.66 -0.1 4,221,282 - efeO NOLOHH_21485 0.85 -0.4 4,221,384 - -0.3 4,221,384 - +0.2 4,221,459 - +0.6 4,221,502 - -0.5 4,221,502 - -0.2 4,221,582 - -0.9 4,221,777 - efeU NOLOHH_21490 0.32 -0.1 4,221,777 - efeU NOLOHH_21490 0.32 -1.4 4,222,259 + -1.6 4,222,264 + +1.2 4,222,316 + +0.4 4,222,316 + +0.8 4,222,316 + -0.8 4,222,489 + -1.5 4,222,489 + -0.1 4,222,491 + -1.4 4,222,491 + -0.2 4,222,491 + -0.4 4,222,570 - -0.1 4,222,599 + +1.2 4,222,599 + -0.8 4,222,618 - +1.1 4,222,618 - +0.0 4,222,637 - +0.1 4,222,672 + -0.7 4,222,672 + -1.9 4,222,691 + +0.5 4,222,691 + +0.4 4,222,932 - -1.3 4,223,005 - -0.4 4,223,005 - +0.5 4,223,112 - -1.2 4,223,305 - putP NOLOHH_21495 0.20 +0.6 4,223,313 - putP NOLOHH_21495 0.21 +0.1
Or see this region's nucleotide sequence