Experiment: Control_ECOR27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yegS and yegR are separated by 354 nucleotides yegR and yegQ are separated by 329 nucleotides
NOLOHH_15485: yegS - lipid kinase YegS, at 3,044,721 to 3,045,620
yegS
NOLOHH_15490: yegR - Uncharacterized protein YegR, at 3,045,975 to 3,046,352
yegR
NOLOHH_15500: yegQ - tRNA 5-hydroxyuridine modification protein YegQ, at 3,046,682 to 3,048,043
yegQ
Position (kb)
3045
3046
3047 Strain fitness (log2 ratio)
-1
0
1 at 3045.250 kb on - strand, within yegS at 3045.471 kb on + strand, within yegS at 3045.472 kb on - strand, within yegS at 3045.475 kb on + strand, within yegS at 3045.475 kb on + strand, within yegS at 3045.545 kb on + strand at 3045.654 kb on - strand at 3046.282 kb on + strand, within yegR at 3046.448 kb on - strand at 3046.448 kb on - strand at 3046.448 kb on - strand at 3046.504 kb on + strand at 3046.538 kb on - strand at 3046.631 kb on - strand at 3046.781 kb on - strand at 3046.781 kb on - strand at 3046.781 kb on - strand at 3046.783 kb on - strand at 3046.808 kb on - strand at 3046.996 kb on - strand, within yegQ at 3046.996 kb on - strand, within yegQ at 3046.996 kb on - strand, within yegQ at 3047.154 kb on + strand, within yegQ at 3047.157 kb on + strand, within yegQ at 3047.220 kb on - strand, within yegQ at 3047.260 kb on - strand, within yegQ at 3047.260 kb on - strand, within yegQ at 3047.260 kb on - strand, within yegQ at 3047.260 kb on - strand, within yegQ at 3047.260 kb on - strand, within yegQ at 3047.292 kb on + strand, within yegQ
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECOR27 remove 3,045,250 - yegS NOLOHH_15485 0.59 +1.1 3,045,471 + yegS NOLOHH_15485 0.83 -0.6 3,045,472 - yegS NOLOHH_15485 0.83 -1.0 3,045,475 + yegS NOLOHH_15485 0.84 -0.5 3,045,475 + yegS NOLOHH_15485 0.84 +0.9 3,045,545 + +1.1 3,045,654 - +0.9 3,046,282 + yegR NOLOHH_15490 0.81 -1.1 3,046,448 - -0.5 3,046,448 - +0.9 3,046,448 - +0.1 3,046,504 + -0.2 3,046,538 - -0.2 3,046,631 - +0.7 3,046,781 - +0.4 3,046,781 - +0.3 3,046,781 - +0.5 3,046,783 - +0.8 3,046,808 - -0.1 3,046,996 - yegQ NOLOHH_15500 0.23 -0.1 3,046,996 - yegQ NOLOHH_15500 0.23 +1.3 3,046,996 - yegQ NOLOHH_15500 0.23 +1.1 3,047,154 + yegQ NOLOHH_15500 0.35 +1.0 3,047,157 + yegQ NOLOHH_15500 0.35 -1.0 3,047,220 - yegQ NOLOHH_15500 0.40 +1.3 3,047,260 - yegQ NOLOHH_15500 0.42 +0.3 3,047,260 - yegQ NOLOHH_15500 0.42 +0.6 3,047,260 - yegQ NOLOHH_15500 0.42 +0.2 3,047,260 - yegQ NOLOHH_15500 0.42 +1.0 3,047,260 - yegQ NOLOHH_15500 0.42 +0.3 3,047,292 + yegQ NOLOHH_15500 0.45 +0.8
Or see this region's nucleotide sequence