Experiment: Control_ECOR27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yjgN and yjgM are separated by 192 nucleotides yjgM and rraB are separated by 45 nucleotides rraB and argF are separated by 161 nucleotides
NOLOHH_04075: yjgN - Inner membrane protein YjgN, at 737,382 to 738,578
yjgN
NOLOHH_04080: yjgM - Uncharacterized N-acetyltransferase YjgM, at 738,771 to 739,274
yjgM
NOLOHH_04085: rraB - ribonuclease E inhibitor RraB, at 739,320 to 739,736
rraB
NOLOHH_04090: argF - ornithine carbamoyltransferase, at 739,898 to 740,902
argF
Position (kb) 739
740 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 738.429 kb on - strand, within yjgN at 738.455 kb on - strand, within yjgN at 738.696 kb on + strand at 738.800 kb on - strand at 738.924 kb on + strand, within yjgM at 738.925 kb on - strand, within yjgM at 738.925 kb on - strand, within yjgM at 738.933 kb on + strand, within yjgM at 738.933 kb on + strand, within yjgM at 738.933 kb on + strand, within yjgM at 738.933 kb on + strand, within yjgM at 738.933 kb on + strand, within yjgM at 738.933 kb on + strand, within yjgM at 738.933 kb on + strand, within yjgM at 738.933 kb on + strand, within yjgM at 738.934 kb on - strand, within yjgM at 738.934 kb on - strand, within yjgM at 738.936 kb on - strand, within yjgM at 738.970 kb on - strand, within yjgM at 738.970 kb on - strand, within yjgM at 739.050 kb on + strand, within yjgM at 739.050 kb on + strand, within yjgM at 739.050 kb on + strand, within yjgM at 739.143 kb on + strand, within yjgM at 739.208 kb on + strand, within yjgM at 739.209 kb on - strand, within yjgM at 739.240 kb on + strand at 739.240 kb on + strand at 739.240 kb on + strand at 739.241 kb on - strand at 739.241 kb on - strand at 739.241 kb on - strand at 739.310 kb on - strand at 739.310 kb on - strand at 739.318 kb on - strand at 739.321 kb on + strand at 739.396 kb on + strand, within rraB at 739.396 kb on + strand, within rraB at 739.397 kb on - strand, within rraB at 739.415 kb on - strand, within rraB at 739.643 kb on - strand, within rraB at 739.643 kb on - strand, within rraB at 739.750 kb on + strand at 739.750 kb on + strand at 739.751 kb on - strand at 739.765 kb on - strand at 739.770 kb on + strand at 739.771 kb on - strand at 739.771 kb on - strand at 739.817 kb on + strand at 739.897 kb on + strand at 739.897 kb on + strand at 739.897 kb on + strand at 739.897 kb on + strand at 739.897 kb on + strand at 739.898 kb on - strand at 739.898 kb on - strand at 739.898 kb on - strand at 739.898 kb on - strand at 740.033 kb on - strand, within argF at 740.033 kb on - strand, within argF at 740.099 kb on + strand, within argF at 740.119 kb on + strand, within argF at 740.123 kb on + strand, within argF at 740.123 kb on + strand, within argF at 740.123 kb on + strand, within argF at 740.123 kb on + strand, within argF at 740.124 kb on - strand, within argF at 740.124 kb on - strand, within argF at 740.124 kb on - strand, within argF at 740.155 kb on + strand, within argF at 740.155 kb on + strand, within argF at 740.156 kb on - strand, within argF at 740.156 kb on - strand, within argF at 740.198 kb on + strand, within argF at 740.198 kb on + strand, within argF at 740.198 kb on + strand, within argF at 740.198 kb on + strand, within argF at 740.198 kb on + strand, within argF at 740.198 kb on + strand, within argF at 740.198 kb on + strand, within argF at 740.199 kb on - strand, within argF at 740.199 kb on - strand, within argF at 740.199 kb on - strand, within argF at 740.199 kb on - strand, within argF at 740.199 kb on - strand, within argF at 740.256 kb on - strand, within argF at 740.378 kb on + strand, within argF at 740.379 kb on - strand, within argF at 740.395 kb on + strand, within argF at 740.395 kb on + strand, within argF at 740.395 kb on + strand, within argF at 740.395 kb on + strand, within argF at 740.396 kb on - strand, within argF at 740.533 kb on + strand, within argF at 740.536 kb on + strand, within argF at 740.553 kb on + strand, within argF at 740.582 kb on - strand, within argF at 740.582 kb on - strand, within argF at 740.585 kb on + strand, within argF at 740.585 kb on + strand, within argF at 740.586 kb on - strand, within argF at 740.587 kb on + strand, within argF at 740.595 kb on + strand, within argF at 740.595 kb on + strand, within argF at 740.595 kb on + strand, within argF at 740.595 kb on + strand, within argF at 740.595 kb on + strand, within argF at 740.596 kb on - strand, within argF at 740.596 kb on - strand, within argF at 740.596 kb on - strand, within argF at 740.596 kb on - strand, within argF at 740.596 kb on - strand, within argF at 740.646 kb on + strand, within argF
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECOR27 remove 738,429 - yjgN NOLOHH_04075 0.87 +0.4 738,455 - yjgN NOLOHH_04075 0.90 -0.1 738,696 + -0.7 738,800 - -0.4 738,924 + yjgM NOLOHH_04080 0.30 -0.0 738,925 - yjgM NOLOHH_04080 0.31 -0.1 738,925 - yjgM NOLOHH_04080 0.31 +1.7 738,933 + yjgM NOLOHH_04080 0.32 +0.3 738,933 + yjgM NOLOHH_04080 0.32 +0.4 738,933 + yjgM NOLOHH_04080 0.32 +0.1 738,933 + yjgM NOLOHH_04080 0.32 -0.3 738,933 + yjgM NOLOHH_04080 0.32 +0.1 738,933 + yjgM NOLOHH_04080 0.32 -0.6 738,933 + yjgM NOLOHH_04080 0.32 +0.3 738,933 + yjgM NOLOHH_04080 0.32 -2.2 738,934 - yjgM NOLOHH_04080 0.32 +0.4 738,934 - yjgM NOLOHH_04080 0.32 +0.1 738,936 - yjgM NOLOHH_04080 0.33 +0.3 738,970 - yjgM NOLOHH_04080 0.39 -0.6 738,970 - yjgM NOLOHH_04080 0.39 -0.1 739,050 + yjgM NOLOHH_04080 0.55 +0.1 739,050 + yjgM NOLOHH_04080 0.55 +0.0 739,050 + yjgM NOLOHH_04080 0.55 +1.2 739,143 + yjgM NOLOHH_04080 0.74 -0.1 739,208 + yjgM NOLOHH_04080 0.87 +0.4 739,209 - yjgM NOLOHH_04080 0.87 -0.4 739,240 + -0.2 739,240 + +0.3 739,240 + -0.8 739,241 - -0.9 739,241 - +0.4 739,241 - +0.3 739,310 - +0.1 739,310 - -0.1 739,318 - +0.2 739,321 + -1.7 739,396 + rraB NOLOHH_04085 0.18 -0.1 739,396 + rraB NOLOHH_04085 0.18 -1.2 739,397 - rraB NOLOHH_04085 0.18 -0.2 739,415 - rraB NOLOHH_04085 0.23 -1.9 739,643 - rraB NOLOHH_04085 0.77 -0.9 739,643 - rraB NOLOHH_04085 0.77 -0.5 739,750 + +0.1 739,750 + -0.3 739,751 - -1.1 739,765 - +0.6 739,770 + -0.1 739,771 - -1.1 739,771 - +0.9 739,817 + +0.2 739,897 + -0.9 739,897 + -0.0 739,897 + +0.1 739,897 + -0.9 739,897 + -0.8 739,898 - +1.2 739,898 - -0.2 739,898 - -0.6 739,898 - +1.0 740,033 - argF NOLOHH_04090 0.13 +2.6 740,033 - argF NOLOHH_04090 0.13 -0.7 740,099 + argF NOLOHH_04090 0.20 -0.5 740,119 + argF NOLOHH_04090 0.22 +1.9 740,123 + argF NOLOHH_04090 0.22 +0.1 740,123 + argF NOLOHH_04090 0.22 +0.2 740,123 + argF NOLOHH_04090 0.22 +0.3 740,123 + argF NOLOHH_04090 0.22 -0.4 740,124 - argF NOLOHH_04090 0.22 +0.8 740,124 - argF NOLOHH_04090 0.22 -1.0 740,124 - argF NOLOHH_04090 0.22 -0.8 740,155 + argF NOLOHH_04090 0.26 +0.3 740,155 + argF NOLOHH_04090 0.26 +0.9 740,156 - argF NOLOHH_04090 0.26 +0.0 740,156 - argF NOLOHH_04090 0.26 +0.1 740,198 + argF NOLOHH_04090 0.30 +0.2 740,198 + argF NOLOHH_04090 0.30 +0.1 740,198 + argF NOLOHH_04090 0.30 -1.7 740,198 + argF NOLOHH_04090 0.30 +1.4 740,198 + argF NOLOHH_04090 0.30 +0.5 740,198 + argF NOLOHH_04090 0.30 +0.1 740,198 + argF NOLOHH_04090 0.30 +0.3 740,199 - argF NOLOHH_04090 0.30 -0.5 740,199 - argF NOLOHH_04090 0.30 +0.3 740,199 - argF NOLOHH_04090 0.30 -0.4 740,199 - argF NOLOHH_04090 0.30 -0.8 740,199 - argF NOLOHH_04090 0.30 +0.4 740,256 - argF NOLOHH_04090 0.36 +0.9 740,378 + argF NOLOHH_04090 0.48 +0.2 740,379 - argF NOLOHH_04090 0.48 -0.0 740,395 + argF NOLOHH_04090 0.49 +0.8 740,395 + argF NOLOHH_04090 0.49 +0.1 740,395 + argF NOLOHH_04090 0.49 -0.6 740,395 + argF NOLOHH_04090 0.49 -1.9 740,396 - argF NOLOHH_04090 0.50 -0.4 740,533 + argF NOLOHH_04090 0.63 +3.1 740,536 + argF NOLOHH_04090 0.63 +1.0 740,553 + argF NOLOHH_04090 0.65 +1.3 740,582 - argF NOLOHH_04090 0.68 -0.9 740,582 - argF NOLOHH_04090 0.68 -0.6 740,585 + argF NOLOHH_04090 0.68 -0.9 740,585 + argF NOLOHH_04090 0.68 +0.4 740,586 - argF NOLOHH_04090 0.68 -0.7 740,587 + argF NOLOHH_04090 0.69 -0.4 740,595 + argF NOLOHH_04090 0.69 +0.1 740,595 + argF NOLOHH_04090 0.69 +0.7 740,595 + argF NOLOHH_04090 0.69 +1.3 740,595 + argF NOLOHH_04090 0.69 +0.2 740,595 + argF NOLOHH_04090 0.69 -1.1 740,596 - argF NOLOHH_04090 0.69 +0.8 740,596 - argF NOLOHH_04090 0.69 -0.8 740,596 - argF NOLOHH_04090 0.69 +0.1 740,596 - argF NOLOHH_04090 0.69 -0.3 740,596 - argF NOLOHH_04090 0.69 +0.2 740,646 + argF NOLOHH_04090 0.74 +0.4
Or see this region's nucleotide sequence