Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10225

Experiment: D-Fructose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose 2.5 mg/ml (C)
2,727,423	-		ABI39_RS10220	0.20	-0.2
2,727,464	+		ABI39_RS10220	0.23	-0.5
2,727,464	+		ABI39_RS10220	0.23	+0.2
2,727,467	-		ABI39_RS10220	0.23	-0.7
2,727,467	-		ABI39_RS10220	0.23	+0.2
2,727,518	+		ABI39_RS10220	0.28	+0.3
2,727,549	-		ABI39_RS10220	0.31	-0.5
2,727,637	+		ABI39_RS10220	0.38	+0.3
2,727,681	-		ABI39_RS10220	0.42	-0.3
2,727,745	-		ABI39_RS10220	0.48	-0.1
2,727,745	-		ABI39_RS10220	0.48	-0.3
2,727,773	-		ABI39_RS10220	0.50	-0.5
2,727,778	+		ABI39_RS10220	0.51	-0.2
2,727,778	+		ABI39_RS10220	0.51	+0.2
2,727,778	+		ABI39_RS10220	0.51	+0.3
2,727,779	-		ABI39_RS10220	0.51	-0.3
2,727,779	-		ABI39_RS10220	0.51	-1.6
2,727,781	-		ABI39_RS10220	0.51	-0.9
2,727,784	+		ABI39_RS10220	0.51	+0.5
2,727,785	-		ABI39_RS10220	0.51	-0.4
2,727,869	-		ABI39_RS10220	0.59	-0.8
2,728,010	+		ABI39_RS10220	0.71	-0.3
2,728,014	+		ABI39_RS10220	0.71	-0.1
2,728,146	-		ABI39_RS10220	0.83	-0.8
2,728,202	-		ABI39_RS10220	0.88	-0.7
2,728,202	-		ABI39_RS10220	0.88	-0.3
2,728,292	-				-0.7
2,728,316	+				+0.1
2,728,321	-				+0.6
2,728,515	-		ABI39_RS10225	0.21	-1.6
2,728,531	+		ABI39_RS10225	0.24	-1.1
2,728,532	-		ABI39_RS10225	0.25	-1.9
2,728,606	+		ABI39_RS10225	0.40	+0.5
2,728,696	-		ABI39_RS10225	0.58	+0.2
2,728,696	-		ABI39_RS10225	0.58	+0.0
2,728,717	-		ABI39_RS10225	0.63	-0.2
2,728,760	+		ABI39_RS10225	0.72	-0.6
2,728,769	-		ABI39_RS10225	0.73	-3.1
2,728,769	-		ABI39_RS10225	0.73	-0.3
2,728,851	-				-0.6
2,729,011	-				-0.3
2,729,011	-				-0.6
2,729,037	+				-0.2
2,729,061	+				+0.6
2,729,061	+				+0.3
2,729,062	-				-0.5
2,729,062	-				+0.1
2,729,071	+				-0.2
2,729,072	-				-0.7
2,729,080	-				+0.7
2,729,090	-				-0.6
2,729,308	+		ABI39_RS10230	0.34	+0.5
2,729,308	+		ABI39_RS10230	0.34	+0.1
2,729,312	-		ABI39_RS10230	0.35	+0.4
2,729,398	+		ABI39_RS10230	0.45	-0.5
2,729,452	+		ABI39_RS10230	0.51	-1.0
2,729,452	+		ABI39_RS10230	0.51	-0.0
2,729,453	-		ABI39_RS10230	0.51	-0.1
2,729,456	+		ABI39_RS10230	0.52	+0.6
2,729,457	-		ABI39_RS10230	0.52	-0.3
2,729,457	-		ABI39_RS10230	0.52	+0.2
2,729,457	-		ABI39_RS10230	0.52	+0.1
2,729,528	-		ABI39_RS10230	0.60	-0.6
2,729,531	-		ABI39_RS10230	0.60	+0.2
2,729,763	-		ABI39_RS10230	0.87	+0.2
2,729,792	+				+0.9
2,729,792	+				+0.9
2,729,793	-				+2.3
2,729,793	-				-0.6
2,729,867	+				+0.2