Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS07825

Experiment: D-Fructose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose 2.5 mg/ml (C)
2,118,073	+		ABI39_RS07815	0.35	+0.9
2,118,090	+		ABI39_RS07815	0.38	+0.5
2,118,224	+		ABI39_RS07815	0.65	+0.6
2,118,273	+		ABI39_RS07815	0.75	+1.3
2,118,496	-				+0.4
2,118,498	-				+0.6
2,118,515	-				+0.2
2,118,515	-				+0.6
2,118,634	-		ABI39_RS07820	0.40	+1.2
2,118,660	+		ABI39_RS07820	0.47	-0.9
2,118,697	+		ABI39_RS07820	0.56	-0.8
2,118,709	-		ABI39_RS07820	0.59	+0.8
2,118,731	-		ABI39_RS07820	0.65	+0.9
2,118,738	+		ABI39_RS07820	0.67	-1.6
2,118,739	-		ABI39_RS07820	0.67	+0.4
2,118,739	-		ABI39_RS07820	0.67	+0.4
2,118,739	-		ABI39_RS07820	0.67	+1.1
2,118,741	-		ABI39_RS07820	0.67	+0.9
2,118,757	-		ABI39_RS07820	0.72	+1.0
2,118,856	+				-3.0
2,118,930	-				+1.1
2,119,045	+				+0.8
2,119,046	-				+1.5
2,119,103	+		ABI39_RS07825	0.10	+0.6
2,119,103	+		ABI39_RS07825	0.10	+0.9
2,119,138	+		ABI39_RS07825	0.13	+0.5
2,119,138	+		ABI39_RS07825	0.13	+1.1
2,119,159	-		ABI39_RS07825	0.14	+1.1
2,119,193	+		ABI39_RS07825	0.17	+0.2
2,119,307	-		ABI39_RS07825	0.25	+0.8
2,119,673	+		ABI39_RS07825	0.52	-0.0
2,119,674	-		ABI39_RS07825	0.52	+1.1
2,119,822	-		ABI39_RS07825	0.63	+0.9
2,119,878	+		ABI39_RS07825	0.67	+0.9
2,119,886	-		ABI39_RS07825	0.68	+1.5
2,119,905	-		ABI39_RS07825	0.69	-0.2
2,119,905	-		ABI39_RS07825	0.69	+0.5
2,120,032	+		ABI39_RS07825	0.78	+0.3
2,120,034	+		ABI39_RS07825	0.79	+0.8
2,120,253	-				+1.5
2,120,271	-				+0.8
2,120,303	-				+0.9
2,120,303	-				+0.8
2,120,332	+				+0.4
2,120,378	+				-1.0
2,120,411	+				+0.9
2,120,417	+				+0.5
2,120,536	-		ABI39_RS07830	0.22	-0.5
2,120,542	-		ABI39_RS07830	0.23	+0.4
2,120,542	-		ABI39_RS07830	0.23	+0.5
2,120,547	-		ABI39_RS07830	0.24	+0.5
2,120,645	+		ABI39_RS07830	0.34	+1.0
2,120,646	-		ABI39_RS07830	0.35	-0.1
2,120,648	+		ABI39_RS07830	0.35	-0.0
2,120,748	+		ABI39_RS07830	0.46	-0.9
2,120,749	-		ABI39_RS07830	0.46	+0.6
2,120,835	-		ABI39_RS07830	0.55	+0.1
2,121,021	-		ABI39_RS07830	0.76	-0.1
2,121,021	-		ABI39_RS07830	0.76	+0.4
2,121,094	-		ABI39_RS07830	0.84	+0.6
2,121,095	+		ABI39_RS07830	0.84	+0.6
2,121,123	-		ABI39_RS07830	0.87	+0.0
2,121,132	-		ABI39_RS07830	0.88	+0.3
2,121,235	-				+0.4