Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS07030

Experiment: Locust bean gum; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Locust bean gum; autoclaved 2.5 mg/ml (C)
1,943,098	+				+0.5
1,943,180	+				+0.4
1,943,181	-				-0.6
1,943,202	+				+0.8
1,943,202	+				-0.3
1,943,203	-				+0.4
1,943,239	+				-0.1
1,943,239	+				-0.2
1,943,240	-				+0.9
1,943,322	+				-0.0
1,943,322	+				-1.4
1,943,322	+				-0.6
1,943,323	-				+0.4
1,943,496	+				+0.9
1,943,691	+		ABI39_RS07030	0.32	+0.1
1,943,766	-		ABI39_RS07030	0.41	-0.3
1,943,812	+		ABI39_RS07030	0.46	+0.3
1,943,813	-		ABI39_RS07030	0.46	+1.6
1,943,813	-		ABI39_RS07030	0.46	+0.5
1,943,849	-		ABI39_RS07030	0.50	+0.6
1,943,851	+		ABI39_RS07030	0.50	-0.5
1,943,851	+		ABI39_RS07030	0.50	-0.1
1,943,852	-		ABI39_RS07030	0.51	+0.2
1,943,860	+		ABI39_RS07030	0.51	+0.1
1,943,959	+		ABI39_RS07030	0.63	+0.5
1,944,033	+		ABI39_RS07030	0.71	-0.3
1,944,272	-				+0.2
1,944,279	+				+0.3
1,944,314	+				+0.3
1,944,315	-				-0.5
1,944,316	+				+0.4
1,944,317	-				-0.2
1,944,319	-				+0.7
1,945,194	-				+0.0
1,945,194	-				-0.5
1,945,198	-				+0.2
1,945,198	-				-0.9
1,945,198	-				+0.3
1,945,202	-				-1.1
1,945,218	-				-0.8
1,945,245	-				+0.8