Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS19485

Experiment: Pectin from citrus peel; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from citrus peel; autoclaved 2.5 mg/ml (C)
4,864,196	+		ABI39_RS19480	0.13	-1.9
4,864,292	+		ABI39_RS19480	0.22	-1.3
4,864,293	-		ABI39_RS19480	0.22	+0.1
4,864,297	-		ABI39_RS19480	0.22	+0.4
4,864,332	-		ABI39_RS19480	0.26	-0.0
4,864,364	-		ABI39_RS19480	0.28	-2.4
4,864,469	-		ABI39_RS19480	0.38	+0.3
4,864,584	-		ABI39_RS19480	0.48	-1.0
4,864,584	-		ABI39_RS19480	0.48	-0.4
4,864,588	-		ABI39_RS19480	0.49	+1.8
4,864,683	-		ABI39_RS19480	0.57	-0.5
4,864,683	-		ABI39_RS19480	0.57	+0.9
4,864,683	-		ABI39_RS19480	0.57	-1.0
4,864,767	-		ABI39_RS19480	0.65	+0.4
4,864,783	-		ABI39_RS19480	0.66	-0.3
4,864,885	-		ABI39_RS19480	0.75	-0.8
4,864,885	-		ABI39_RS19480	0.75	-0.9
4,864,927	-		ABI39_RS19480	0.79	+0.8
4,864,927	-		ABI39_RS19480	0.79	+1.8
4,865,025	-		ABI39_RS19480	0.88	-0.2
4,865,028	-		ABI39_RS19480	0.88	+0.3
4,865,028	-		ABI39_RS19480	0.88	+0.1
4,865,077	-				+0.1
4,865,079	-				-0.3
4,865,330	+		ABI39_RS19485	0.39	-0.4
4,865,465	+		ABI39_RS19485	0.71	-1.6
4,865,556	+				-2.6
4,865,627	-		ABI39_RS19490	0.24	-0.2
4,865,668	+		ABI39_RS19490	0.30	+3.0
4,865,749	+		ABI39_RS19490	0.42	-0.2
4,865,770	-		ABI39_RS19490	0.45	-0.8
4,865,846	+		ABI39_RS19490	0.57	-0.4
4,865,849	+		ABI39_RS19490	0.57	+0.2
4,865,970	-		ABI39_RS19490	0.75	-0.5
4,866,129	-				+0.7
4,866,165	+				+0.9
4,866,238	-		ABI39_RS19495	0.19	-0.0
4,866,331	-		ABI39_RS19495	0.32	-0.2
4,866,432	-		ABI39_RS19495	0.46	-0.6