Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS17150

Experiment: Pectin from citrus peel; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from citrus peel; autoclaved 2.5 mg/ml (C)
4,337,711	+				-0.4
4,337,820	+				+0.2
4,338,133	-		ABI39_RS17145	0.34	+0.5
4,338,315	-		ABI39_RS17145	0.55	+0.1
4,338,643	-				+0.9
4,338,661	+				-2.3
4,338,761	+				+0.9
4,338,946	+		ABI39_RS17150	0.22	-1.3
4,339,006	-		ABI39_RS17150	0.27	-1.3
4,339,175	+		ABI39_RS17150	0.43	+0.9
4,339,175	+		ABI39_RS17150	0.43	-0.1
4,339,176	-		ABI39_RS17150	0.43	+0.5
4,339,245	+		ABI39_RS17150	0.49	+0.5
4,339,248	+		ABI39_RS17150	0.49	+0.9
4,339,343	-		ABI39_RS17150	0.58	-0.7
4,339,374	-		ABI39_RS17150	0.61	-0.1
4,339,397	+		ABI39_RS17150	0.63	+0.9
4,339,426	-		ABI39_RS17150	0.65	+0.1
4,339,490	-		ABI39_RS17150	0.71	+0.5
4,339,530	+		ABI39_RS17150	0.75	-0.7
4,339,629	-		ABI39_RS17150	0.84	-0.3
4,339,786	+				-0.6
4,339,787	-				-0.5
4,339,788	+				+0.6
4,339,788	+				-0.4
4,339,789	-				+0.1
4,339,846	+				+0.5
4,339,850	+				-1.3
4,339,851	-				+1.5
4,339,876	+				+0.9
4,339,884	-				+0.9
4,339,888	+				-0.1
4,339,918	-				+0.5
4,339,946	-		ABI39_RS17155	0.12	+1.5
4,340,205	+		ABI39_RS17155	0.38	-0.3
4,340,206	-		ABI39_RS17155	0.38	+0.5
4,340,431	-		ABI39_RS17155	0.61	+0.5
4,340,475	+		ABI39_RS17155	0.65	+0.9