Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS14030

Experiment: Pectin from citrus peel; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from citrus peel; autoclaved 2.5 mg/ml (C)
3,648,457	-				-0.1
3,648,483	+				+0.5
3,649,356	+				+1.5
3,649,356	+				-3.1
3,649,357	-				-0.8
3,649,360	+				-2.2
3,649,360	+				-2.7
3,649,398	-				-2.5
3,649,456	+				-2.0
3,649,457	-				+0.9
3,649,855	+		ABI39_RS14030	0.43	-2.5
3,650,022	+		ABI39_RS14030	0.57	-0.1
3,650,236	+		ABI39_RS14030	0.75	-2.0
3,650,367	-		ABI39_RS14030	0.87	-0.3
3,650,370	+		ABI39_RS14030	0.87	-0.5
3,650,398	-		ABI39_RS14030	0.89	+0.2
3,650,570	-				-0.5
3,650,580	-				+0.3
3,650,594	+				+0.8
3,650,596	+				-0.6
3,650,624	+				+1.7
3,650,688	+				-0.5
3,650,689	-				+0.3
3,650,711	+				-0.5
3,651,390	-		ABI39_RS14035	0.47	+1.0