Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS11485

Experiment: Pectin from citrus peel; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from citrus peel; autoclaved 2.5 mg/ml (C)
3,056,176	-		ABI39_RS11480	0.55	+0.3
3,056,478	-		ABI39_RS11480	0.71	+0.9
3,056,500	+		ABI39_RS11480	0.72	+0.1
3,056,550	+		ABI39_RS11480	0.75	-0.7
3,056,680	+		ABI39_RS11480	0.82	+0.0
3,056,680	+		ABI39_RS11480	0.82	+0.0
3,056,999	+				+0.3
3,057,004	-				+0.3
3,057,042	-				+0.1
3,057,044	-				+0.6
3,057,044	-				+0.1
3,057,072	+				-0.4
3,057,142	+				-0.6
3,057,164	+		ABI39_RS11485	0.14	+0.8
3,057,275	-		ABI39_RS11485	0.34	-2.3
3,057,277	+		ABI39_RS11485	0.34	-0.2
3,057,278	-		ABI39_RS11485	0.34	-1.1
3,057,435	-		ABI39_RS11485	0.62	+0.0
3,057,522	+		ABI39_RS11485	0.78	-1.3
3,057,523	-		ABI39_RS11485	0.78	-0.9
3,057,540	-		ABI39_RS11485	0.81	-0.9
3,057,560	+		ABI39_RS11485	0.85	-1.9
3,057,614	-				-1.3
3,057,621	-				+0.0
3,057,627	-				-0.6
3,057,656	+				-1.9
3,057,656	+				+0.6
3,057,773	-		ABI39_RS11490	0.47	+0.6
3,057,884	-				-0.6
3,057,926	-				+0.1
3,057,969	+				-0.1
3,058,016	+				-1.1