Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS06235

Experiment: Pectin from citrus peel; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from citrus peel; autoclaved 2.5 mg/ml (C)
1,729,812	-				-0.3
1,730,006	+		ABI39_RS06235	0.11	-1.7
1,730,052	-		ABI39_RS06235	0.15	-2.3
1,730,052	-		ABI39_RS06235	0.15	-0.5
1,730,220	+		ABI39_RS06235	0.31	-2.2
1,730,220	+		ABI39_RS06235	0.31	-0.5
1,730,221	-		ABI39_RS06235	0.31	-0.6
1,730,439	-		ABI39_RS06235	0.50	-2.1
1,730,470	-		ABI39_RS06235	0.53	-2.4
1,730,526	+		ABI39_RS06235	0.58	+0.2
1,730,529	-		ABI39_RS06235	0.58	-2.3
1,730,776	+		ABI39_RS06235	0.81	-2.4
1,730,814	+		ABI39_RS06235	0.84	-2.6
1,730,825	+		ABI39_RS06235	0.85	-2.5
1,730,829	+		ABI39_RS06235	0.86	-1.9
1,730,830	-		ABI39_RS06235	0.86	-0.9
1,730,962	+				+0.3
1,731,934	-				-0.5