Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS15530

Experiment: polygalacturonic; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic; autoclaved 2.5 mg/ml (C)
4,014,145	-				+0.2
4,014,223	+				-0.9
4,014,231	+				+0.0
4,014,231	+				-1.4
4,014,283	+				+0.9
4,014,399	-				+0.3
4,014,484	-				+1.7
4,014,568	+				-0.3
4,014,644	-				+0.4
4,014,654	-				+0.7
4,014,681	+				-0.1
4,014,682	-				+0.1
4,014,775	-				+0.0
4,014,878	-				+0.4
4,014,878	-				+0.4
4,015,016	+		ABI39_RS15530	0.22	+0.2
4,015,216	-		ABI39_RS15530	0.57	+0.4
4,015,216	-		ABI39_RS15530	0.57	-0.9
4,015,441	-				-0.2
4,015,454	+				-0.8
4,015,455	-				-0.5
4,015,457	+				+0.5
4,015,458	-				+0.8
4,015,702	-		ABI39_RS15535	0.45	-1.0
4,015,811	-		ABI39_RS15535	0.65	-0.2
4,015,812	+		ABI39_RS15535	0.66	-0.9
4,015,914	-		ABI39_RS15535	0.85	-0.5
4,016,024	-				-0.3
4,016,024	-				+0.8
4,016,034	-				-0.5
4,016,060	+				+1.3
4,016,106	-				+0.4
4,016,195	+				-0.3
4,016,226	+				+1.1
4,016,264	+				+0.3
4,016,305	+				+0.1
4,016,326	+				-0.6
4,016,360	-				+0.7
4,016,367	+				-0.8
4,016,368	-				+0.8
4,016,439	-		ABI39_RS15540	0.13	-0.6
4,016,453	+		ABI39_RS15540	0.15	-0.3