Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS15160

Experiment: polygalacturonic; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic; autoclaved 2.5 mg/ml (C)
3,933,251	-		ABI39_RS15150	0.45	-0.6
3,933,255	-		ABI39_RS15150	0.46	+0.1
3,933,255	-		ABI39_RS15150	0.46	-0.2
3,933,278	-		ABI39_RS15150	0.50	-1.2
3,933,292	+		ABI39_RS15150	0.53	+0.1
3,933,293	-		ABI39_RS15150	0.53	+0.5
3,933,369	+		ABI39_RS15150	0.69	+0.2
3,933,395	+		ABI39_RS15150	0.75	-0.2
3,933,414	+		ABI39_RS15150	0.78	-0.1
3,933,432	-		ABI39_RS15150	0.82	+0.0
3,933,432	-		ABI39_RS15150	0.82	+0.6
3,933,485	+				-0.2
3,933,494	+				+0.3
3,933,495	-				+0.4
3,933,502	-				-0.2
3,933,502	-				-0.0
3,933,504	+				+0.2
3,933,525	+				+0.1
3,933,562	+				+0.0
3,933,667	+				+1.0
3,933,780	-				-0.7
3,933,791	+				+0.5
3,933,791	+				-0.3
3,933,792	-				+0.8
3,933,798	-		ABI39_RS15155	0.10	-0.9
3,934,083	-				+0.4
3,934,092	-				+0.7
3,934,196	-				+1.0
3,934,266	+				-0.7
3,934,267	-				+0.8
3,934,267	-				+0.6
3,934,268	+				+0.3
3,934,269	-				+0.2
3,934,273	+		ABI39_RS15160	0.11	+0.0
3,934,333	+		ABI39_RS15160	0.40	+1.0
3,934,334	-		ABI39_RS15160	0.40	+0.7
3,934,348	+		ABI39_RS15160	0.47	+0.9
3,934,348	+		ABI39_RS15160	0.47	+0.2
3,934,349	-		ABI39_RS15160	0.47	-1.7
3,934,458	-				+1.2
3,934,524	-				-1.8
3,934,624	+				+0.5
3,934,663	+				+0.8
3,934,665	+				-0.3
3,934,714	-				+1.2
3,934,715	+				+0.8
3,934,716	-				-0.2
3,934,724	+				+1.1
3,934,795	+				+0.1
3,934,814	+				+0.1
3,934,818	-				-0.3
3,935,000	+				-1.2
3,935,125	-				-0.5
3,935,186	+				+0.3
3,935,186	+				+0.9
3,935,234	+				-0.5
3,935,252	+				-0.9
3,935,355	+				-0.5
3,935,358	-				+0.5