Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS19990

Experiment: polygalacturonic; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic; autoclaved 2.5 mg/ml (C)
4,937,822	-		ABI39_RS19985	0.46	+0.7
4,938,091	-		ABI39_RS19985	0.69	-1.1
4,938,229	-		ABI39_RS19985	0.80	-1.2
4,938,533	-				+3.8
4,938,685	-				-1.0
4,938,705	+				-1.0
4,938,767	-		ABI39_RS19990	0.11	-1.8
4,938,913	+		ABI39_RS19990	0.23	-1.6
4,938,946	+		ABI39_RS19990	0.25	-1.8
4,938,947	-		ABI39_RS19990	0.25	-2.2
4,938,947	-		ABI39_RS19990	0.25	-0.8
4,938,950	-		ABI39_RS19990	0.26	-0.5
4,938,971	-		ABI39_RS19990	0.27	-0.8
4,939,083	+		ABI39_RS19990	0.36	-0.5
4,939,161	-		ABI39_RS19990	0.43	+1.0
4,939,188	-		ABI39_RS19990	0.45	-0.6
4,939,420	-		ABI39_RS19990	0.64	-0.4
4,939,420	-		ABI39_RS19990	0.64	-0.7
4,939,420	-		ABI39_RS19990	0.64	-1.3
4,939,562	-		ABI39_RS19990	0.75	-1.0
4,939,597	-		ABI39_RS19990	0.78	-1.2
4,939,667	+		ABI39_RS19990	0.84	-1.1
4,939,699	+		ABI39_RS19990	0.86	-1.4
4,939,706	+		ABI39_RS19990	0.87	-0.5
4,939,707	-		ABI39_RS19990	0.87	-0.6
4,939,913	-				+0.7
4,939,991	+				+0.5
4,940,045	-		ABI39_RS19995	0.17	+0.3
4,940,267	+		ABI39_RS19995	0.63	+0.5
4,940,342	-		ABI39_RS19995	0.78	+0.4
4,940,342	-		ABI39_RS19995	0.78	+1.3
4,940,454	-				+0.7
4,940,467	+				+0.2
4,940,468	-				+0.3
4,940,497	+				+1.3
4,940,584	-		ABI39_RS20000	0.16	-0.7
4,940,702	-		ABI39_RS20000	0.33	+0.0
4,940,719	-		ABI39_RS20000	0.36	+0.8
4,940,726	+		ABI39_RS20000	0.37	+0.0
4,940,726	+		ABI39_RS20000	0.37	+0.5
4,940,727	-		ABI39_RS20000	0.37	-1.0
4,940,731	+		ABI39_RS20000	0.38	-0.0
4,940,818	+		ABI39_RS20000	0.51	+1.1
4,940,819	-		ABI39_RS20000	0.51	+0.3
4,940,823	-		ABI39_RS20000	0.52	+0.3