Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS13820

Experiment: polygalacturonic; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic; autoclaved 2.5 mg/ml (C)
3,591,461	-		ABI39_RS13815	0.54	-2.2
3,591,596	-		ABI39_RS13815	0.60	-1.1
3,591,630	-		ABI39_RS13815	0.62	-1.8
3,591,675	+		ABI39_RS13815	0.64	-1.6
3,591,869	-		ABI39_RS13815	0.73	-2.4
3,591,931	+		ABI39_RS13815	0.76	-1.8
3,591,932	-		ABI39_RS13815	0.76	-1.9
3,591,932	-		ABI39_RS13815	0.76	-2.0
3,591,994	+		ABI39_RS13815	0.79	-2.5
3,592,052	+		ABI39_RS13815	0.82	-1.4
3,592,062	+		ABI39_RS13815	0.82	-1.7
3,592,090	+		ABI39_RS13815	0.83	-0.1
3,592,091	-		ABI39_RS13815	0.83	-1.7
3,592,139	+		ABI39_RS13815	0.86	-1.9
3,592,203	+		ABI39_RS13815	0.89	-2.0
3,592,205	+		ABI39_RS13815	0.89	-0.9
3,592,205	+		ABI39_RS13815	0.89	-0.3
3,592,221	+		ABI39_RS13815	0.89	-1.2
3,592,278	+				-0.8
3,592,286	+				-0.5
3,592,286	+				-0.4
3,592,286	+				-0.9
3,592,286	+				-0.4
3,592,287	-				-1.4
3,592,291	-				-2.1
3,592,490	-				-1.5
3,592,517	+		ABI39_RS13820	0.14	-0.9
3,592,538	-		ABI39_RS13820	0.19	-2.0
3,592,538	-		ABI39_RS13820	0.19	-1.6
3,592,561	+		ABI39_RS13820	0.23	-1.5
3,592,671	-		ABI39_RS13820	0.45	-1.8
3,592,744	+		ABI39_RS13820	0.60	-1.4
3,592,746	+		ABI39_RS13820	0.61	-0.9
3,592,746	+		ABI39_RS13820	0.61	-0.9
3,592,747	-		ABI39_RS13820	0.61	-2.3
3,592,790	+		ABI39_RS13820	0.69	-1.0
3,592,837	+		ABI39_RS13820	0.79	-1.2
3,592,881	-		ABI39_RS13820	0.88	-1.6
3,592,883	+		ABI39_RS13820	0.88	-0.4
3,592,884	-		ABI39_RS13820	0.88	-1.7
3,592,957	+				+0.9
3,593,009	+				+0.1
3,593,056	-				+0.2
3,593,142	+				-0.3
3,593,143	-				+0.0
3,593,182	+				+2.1
3,593,187	-				-0.4
3,593,239	+				+0.4
3,593,309	+				+1.5
3,593,309	+				+0.2
3,593,310	-				+0.5
3,593,310	-				-0.8
3,593,316	+				-0.8
3,593,317	-				+0.0
3,593,375	+		ABI39_RS13825	0.13	-0.1
3,593,379	+		ABI39_RS13825	0.13	+0.5
3,593,528	-		ABI39_RS13825	0.25	-0.2
3,593,541	-		ABI39_RS13825	0.26	+0.2
3,593,553	-		ABI39_RS13825	0.27	+0.1
3,593,556	+		ABI39_RS13825	0.27	+0.7
3,593,557	-		ABI39_RS13825	0.27	-2.1
3,593,559	-		ABI39_RS13825	0.27	+0.1
3,593,643	-		ABI39_RS13825	0.34	-1.0
3,593,704	+		ABI39_RS13825	0.39	-0.5
3,593,704	+		ABI39_RS13825	0.39	-0.8
3,593,705	-		ABI39_RS13825	0.39	-0.2
3,593,708	+		ABI39_RS13825	0.39	+0.5
3,593,710	+		ABI39_RS13825	0.39	+0.2
3,593,746	+		ABI39_RS13825	0.42	+0.3
3,593,747	-		ABI39_RS13825	0.42	+0.1
3,593,762	+		ABI39_RS13825	0.43	+0.1
3,593,785	+		ABI39_RS13825	0.45	+0.1