Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS11710

Experiment: Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C)
3,108,195	+				-0.6
3,108,294	-		ABI39_RS11705	0.22	+0.3
3,108,334	+		ABI39_RS11705	0.28	-1.2
3,108,342	+		ABI39_RS11705	0.29	+0.0
3,108,351	+		ABI39_RS11705	0.31	+0.1
3,108,360	-		ABI39_RS11705	0.32	+0.0
3,108,498	+		ABI39_RS11705	0.53	-0.8
3,108,536	+		ABI39_RS11705	0.58	-0.9
3,108,536	+		ABI39_RS11705	0.58	-1.4
3,108,593	+		ABI39_RS11705	0.67	+0.2
3,108,593	+		ABI39_RS11705	0.67	-0.3
3,108,594	-		ABI39_RS11705	0.67	+1.0
3,108,597	+		ABI39_RS11705	0.67	-0.2
3,108,734	+		ABI39_RS11705	0.88	+0.6
3,108,740	+		ABI39_RS11705	0.89	-0.0
3,108,743	+		ABI39_RS11705	0.89	+0.6
3,108,845	-				+0.0
3,108,910	+				+0.4
3,108,910	+				+0.7
3,108,910	+				-0.0
3,108,940	+				-0.0
3,109,099	-				+0.2
3,109,103	+				+0.6
3,109,144	-				-0.2
3,109,450	-		ABI39_RS11710	0.61	-0.4
3,109,451	-		ABI39_RS11710	0.61	-0.4
3,109,613	-				-0.4
3,110,140	+		ABI39_RS11720	0.16	+0.7
3,110,509	+		ABI39_RS11720	0.83	+0.4
3,110,572	+				+0.1