Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS09045

Experiment: Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C)
2,420,335	-		ABI39_RS09040	0.48	-3.2
2,420,335	-		ABI39_RS09040	0.48	-1.8
2,420,368	-		ABI39_RS09040	0.50	-2.4
2,420,452	+		ABI39_RS09040	0.56	-3.2
2,420,549	-		ABI39_RS09040	0.62	-2.2
2,420,696	+		ABI39_RS09040	0.72	-3.9
2,420,857	-		ABI39_RS09040	0.83	-3.8
2,420,906	+		ABI39_RS09040	0.87	-2.8
2,420,906	+		ABI39_RS09040	0.87	-2.5
2,420,908	+		ABI39_RS09040	0.87	-4.6
2,420,908	+		ABI39_RS09040	0.87	-3.3
2,420,909	-		ABI39_RS09040	0.87	-1.4
2,420,911	+		ABI39_RS09040	0.87	-4.9
2,420,912	-		ABI39_RS09040	0.87	-2.3
2,421,025	-				-2.6
2,421,114	+				-4.4
2,421,129	+				-1.9
2,421,391	+				-0.8
2,421,398	-				-0.7
2,421,461	-		ABI39_RS09045	0.15	-1.0
2,421,464	+		ABI39_RS09045	0.15	+0.1
2,421,568	+		ABI39_RS09045	0.26	-1.4
2,421,569	-		ABI39_RS09045	0.26	-0.6
2,421,678	-		ABI39_RS09045	0.37	-1.2
2,421,802	-		ABI39_RS09045	0.50	-0.8
2,421,810	+		ABI39_RS09045	0.51	-2.0
2,421,893	+		ABI39_RS09045	0.60	-1.3
2,421,919	+		ABI39_RS09045	0.63	-1.0
2,421,962	+		ABI39_RS09045	0.67	-1.8
2,422,061	-		ABI39_RS09045	0.77	-0.4
2,422,075	+		ABI39_RS09045	0.79	-0.7
2,422,086	+		ABI39_RS09045	0.80	-0.8
2,422,096	-		ABI39_RS09045	0.81	-0.8
2,422,100	-		ABI39_RS09045	0.82	-1.2
2,422,139	-		ABI39_RS09045	0.86	-0.9
2,422,147	+		ABI39_RS09045	0.86	-1.7
2,422,162	+		ABI39_RS09045	0.88	+0.3
2,422,168	-		ABI39_RS09045	0.89	-1.4
2,422,322	-				-0.4
2,422,356	-				+0.4
2,422,370	+				-0.4
2,422,401	+				-0.8
2,422,508	+		ABI39_RS09050	0.15	-2.4
2,422,508	+		ABI39_RS09050	0.15	-0.3
2,422,509	-		ABI39_RS09050	0.15	-1.1
2,422,509	-		ABI39_RS09050	0.15	-0.2
2,422,550	+		ABI39_RS09050	0.18	+0.2
2,422,558	-		ABI39_RS09050	0.19	-2.1
2,422,621	+		ABI39_RS09050	0.23	-0.5
2,422,625	+		ABI39_RS09050	0.24	+0.8
2,422,628	+		ABI39_RS09050	0.24	-1.6
2,422,645	-		ABI39_RS09050	0.25	-0.4
2,422,707	-		ABI39_RS09050	0.30	-1.0
2,422,742	+		ABI39_RS09050	0.32	-1.1
2,422,742	+		ABI39_RS09050	0.32	+0.2
2,422,796	+		ABI39_RS09050	0.36	-1.9
2,422,797	-		ABI39_RS09050	0.36	-1.1
2,422,807	+		ABI39_RS09050	0.37	-1.3
2,422,919	+		ABI39_RS09050	0.45	-1.2
2,422,920	-		ABI39_RS09050	0.45	-0.5
2,422,932	+		ABI39_RS09050	0.46	-0.7
2,422,949	+		ABI39_RS09050	0.47	-1.1
2,422,974	-		ABI39_RS09050	0.49	-0.8
2,423,084	+		ABI39_RS09050	0.57	-1.5
2,423,106	-		ABI39_RS09050	0.58	-0.9
2,423,106	-		ABI39_RS09050	0.58	-1.6
2,423,110	+		ABI39_RS09050	0.59	-0.7
2,423,217	-		ABI39_RS09050	0.66	-0.5
2,423,229	+		ABI39_RS09050	0.67	-0.5
2,423,236	+		ABI39_RS09050	0.68	-0.9