Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS08295

Experiment: Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)
2,216,290	+		ABI39_RS08290	0.28	+0.2
2,216,393	-		ABI39_RS08290	0.36	+2.6
2,216,461	-		ABI39_RS08290	0.42	+0.2
2,216,500	+		ABI39_RS08290	0.45	-0.2
2,216,501	-		ABI39_RS08290	0.45	+1.2
2,216,502	+		ABI39_RS08290	0.45	-1.8
2,216,502	+		ABI39_RS08290	0.45	-0.1
2,216,502	+		ABI39_RS08290	0.45	+0.1
2,216,577	-		ABI39_RS08290	0.51	+0.1
2,216,761	+		ABI39_RS08290	0.66	-2.3
2,216,981	-		ABI39_RS08290	0.84	+1.8
2,217,016	-		ABI39_RS08290	0.87	+0.9
2,217,144	+				+0.5
2,217,186	-				-1.0
2,217,290	+				+0.4
2,217,296	+				-1.3
2,217,314	-				-0.5
2,217,523	-		ABI39_RS08295	0.48	+1.8
2,217,863	+				-0.9
2,217,891	-				-0.8
2,217,920	-				-0.1
2,217,964	-				-0.4
2,218,213	-		ABI39_RS08300	0.16	-0.7
2,218,287	-		ABI39_RS08300	0.22	-0.1
2,218,291	+		ABI39_RS08300	0.22	-0.2
2,218,295	-		ABI39_RS08300	0.22	-0.4
2,218,352	+		ABI39_RS08300	0.26	+0.5
2,218,549	-		ABI39_RS08300	0.41	+0.0
2,218,576	-		ABI39_RS08300	0.43	+1.1
2,218,608	+		ABI39_RS08300	0.45	+0.6
2,218,618	-		ABI39_RS08300	0.46	-0.2
2,218,644	+		ABI39_RS08300	0.47	+0.8
2,218,783	+		ABI39_RS08300	0.57	-0.5