Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS17580

Experiment: Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)
4,441,912	-				-0.2
4,441,981	-		ABI39_RS17575	0.18	+1.5
4,441,982	+		ABI39_RS17575	0.18	-0.5
4,441,982	+		ABI39_RS17575	0.18	+0.4
4,441,983	-		ABI39_RS17575	0.18	-2.7
4,442,038	-		ABI39_RS17575	0.25	+0.7
4,442,061	+		ABI39_RS17575	0.27	+1.1
4,442,077	+		ABI39_RS17575	0.29	-0.9
4,442,123	-		ABI39_RS17575	0.35	-2.0
4,442,160	+		ABI39_RS17575	0.40	-0.1
4,442,165	+		ABI39_RS17575	0.40	+1.0
4,442,165	+		ABI39_RS17575	0.40	-0.9
4,442,196	+		ABI39_RS17575	0.44	+0.3
4,442,215	+		ABI39_RS17575	0.46	+1.4
4,442,216	-		ABI39_RS17575	0.46	-2.3
4,442,216	-		ABI39_RS17575	0.46	-2.3
4,442,225	-		ABI39_RS17575	0.48	-0.8
4,442,299	+		ABI39_RS17575	0.57	+0.1
4,442,299	+		ABI39_RS17575	0.57	+0.3
4,442,318	-		ABI39_RS17575	0.59	+0.6
4,442,357	-		ABI39_RS17575	0.64	-0.7
4,442,485	-		ABI39_RS17575	0.79	-0.6
4,442,503	+		ABI39_RS17575	0.82	-0.5
4,442,545	-		ABI39_RS17575	0.87	+0.1
4,442,626	+				-0.9
4,442,656	-				-0.6
4,442,699	+				+2.0
4,442,752	+				-0.2
4,442,755	+				+0.4
4,442,762	+				-0.4
4,442,762	+				+0.1
4,442,762	+				-0.1
4,442,770	+				+0.4
4,442,777	+				+0.3
4,442,791	+				-0.0
4,442,791	+				+1.0
4,442,839	-		ABI39_RS17580	0.13	-0.9
4,442,878	+		ABI39_RS17580	0.15	-0.2
4,442,893	+		ABI39_RS17580	0.17	-3.4
4,442,915	+		ABI39_RS17580	0.18	-0.2
4,442,919	+		ABI39_RS17580	0.18	+0.1
4,442,919	+		ABI39_RS17580	0.18	+1.4
4,442,920	-		ABI39_RS17580	0.19	-1.5
4,442,921	+		ABI39_RS17580	0.19	-1.1
4,442,957	+		ABI39_RS17580	0.21	-0.5
4,442,958	-		ABI39_RS17580	0.21	+0.1
4,443,009	-		ABI39_RS17580	0.25	-1.6
4,443,020	-		ABI39_RS17580	0.26	-0.9
4,443,020	-		ABI39_RS17580	0.26	-2.8
4,443,029	+		ABI39_RS17580	0.27	+1.5
4,443,030	-		ABI39_RS17580	0.27	-1.7
4,443,030	-		ABI39_RS17580	0.27	+0.1
4,443,093	+		ABI39_RS17580	0.31	-0.7
4,443,094	-		ABI39_RS17580	0.31	-1.3
4,443,094	-		ABI39_RS17580	0.31	+0.1
4,443,103	+		ABI39_RS17580	0.32	-0.8
4,443,162	+		ABI39_RS17580	0.36	-1.0
4,443,166	+		ABI39_RS17580	0.37	+0.1
4,443,176	-		ABI39_RS17580	0.37	+1.6
4,443,224	-		ABI39_RS17580	0.41	-1.2
4,443,459	+		ABI39_RS17580	0.58	+0.2
4,443,631	+		ABI39_RS17580	0.71	+0.9
4,443,632	-		ABI39_RS17580	0.71	-1.2
4,443,636	-		ABI39_RS17580	0.71	+0.1
4,443,717	+		ABI39_RS17580	0.77	-1.3
4,443,718	-		ABI39_RS17580	0.77	-1.4
4,443,718	-		ABI39_RS17580	0.77	-1.8
4,443,718	-		ABI39_RS17580	0.77	-1.6
4,443,722	-		ABI39_RS17580	0.77	-0.9
4,443,925	+				-2.5
4,443,973	+				-4.5
4,443,996	+				+0.6
4,443,997	-				+0.4
4,444,016	+				-0.7
4,444,017	-				-0.9
4,444,017	-				-0.8
4,444,033	+				+0.8
4,444,034	-				+0.9
4,444,112	-				-0.2
4,444,283	+				+1.0
4,444,368	+				+1.3
4,444,397	-				+1.7
4,444,566	+				-1.3
4,444,609	+				-0.4
4,444,788	+		ABI39_RS17590	0.32	-0.3
4,444,830	+		ABI39_RS17590	0.42	-0.3
4,444,938	+		ABI39_RS17590	0.71	-1.1