Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS15665

Experiment: Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)
4,052,654	-		ABI39_RS15660	0.35	-0.1
4,052,667	+		ABI39_RS15660	0.36	-0.6
4,052,710	+		ABI39_RS15660	0.39	-3.5
4,052,786	-		ABI39_RS15660	0.44	-1.1
4,052,813	-		ABI39_RS15660	0.46	-4.2
4,052,817	+		ABI39_RS15660	0.46	-0.8
4,052,822	+		ABI39_RS15660	0.47	+0.2
4,052,830	+		ABI39_RS15660	0.47	+0.1
4,052,834	+		ABI39_RS15660	0.47	-0.5
4,052,867	+		ABI39_RS15660	0.50	+0.9
4,052,867	+		ABI39_RS15660	0.50	-0.6
4,052,937	-		ABI39_RS15660	0.54	-0.9
4,052,979	+		ABI39_RS15660	0.57	-2.1
4,053,021	-		ABI39_RS15660	0.60	-0.4
4,053,316	+		ABI39_RS15660	0.80	+0.0
4,053,317	-		ABI39_RS15660	0.80	+0.9
4,053,317	-		ABI39_RS15660	0.80	+0.1
4,053,356	-		ABI39_RS15660	0.82	-1.1
4,053,416	+		ABI39_RS15660	0.86	-0.5
4,053,416	+		ABI39_RS15660	0.86	-3.4
4,053,429	-		ABI39_RS15660	0.87	-1.4
4,053,545	+				-0.3
4,053,562	+				+0.3
4,053,563	-				+0.4
4,053,637	+				-0.8
4,053,638	-				+0.4
4,053,644	-				-1.4
4,053,681	+				-0.2
4,053,682	-				-1.5
4,053,951	+		ABI39_RS15665	0.34	-2.2
4,053,951	+		ABI39_RS15665	0.34	-1.1
4,053,951	+		ABI39_RS15665	0.34	-0.6
4,053,953	+		ABI39_RS15665	0.34	-1.9
4,053,955	+		ABI39_RS15665	0.34	-1.3
4,053,999	-		ABI39_RS15665	0.38	-0.4
4,054,218	+		ABI39_RS15665	0.60	-1.9
4,054,426	+		ABI39_RS15665	0.81	-4.3
4,054,784	+		ABI39_RS15670	0.20	-2.3
4,054,797	+		ABI39_RS15670	0.21	-1.5
4,054,798	-		ABI39_RS15670	0.21	-0.4
4,054,802	-		ABI39_RS15670	0.21	-1.5
4,054,905	-		ABI39_RS15670	0.32	-0.6
4,054,991	+		ABI39_RS15670	0.42	-1.4
4,055,022	-		ABI39_RS15670	0.45	-2.3
4,055,024	-		ABI39_RS15670	0.45	-0.6
4,055,024	-		ABI39_RS15670	0.45	-2.0
4,055,066	+		ABI39_RS15670	0.50	-0.9
4,055,085	+		ABI39_RS15670	0.52	-1.3
4,055,119	-		ABI39_RS15670	0.55	-2.8
4,055,155	-		ABI39_RS15670	0.59	-1.4
4,055,170	-		ABI39_RS15670	0.61	-0.1
4,055,218	-		ABI39_RS15670	0.66	-0.7
4,055,291	+		ABI39_RS15670	0.74	+0.7
4,055,398	+		ABI39_RS15670	0.85	-1.3
4,055,398	+		ABI39_RS15670	0.85	-0.8
4,055,399	-		ABI39_RS15670	0.85	-0.1
4,055,456	+				+0.2
4,055,520	+				-0.2
4,055,546	+				-0.2