Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS15365

Experiment: Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)
3,977,546	+		ABI39_RS15360	0.51	+0.3
3,977,646	+		ABI39_RS15360	0.58	+0.9
3,978,093	+				+0.4
3,978,094	-				+0.3
3,978,115	+				-0.6
3,978,121	+				+2.8
3,978,222	+				+0.8
3,978,248	-				-0.3
3,978,248	-				-1.6
3,978,325	+				+2.0
3,978,337	-				-0.5
3,978,424	+				-0.8
3,978,424	+				-1.0
3,978,425	-				-0.7
3,978,426	+				-3.7
3,978,431	+				-4.7
3,978,471	-				-4.6
3,979,332	+		ABI39_RS15365	0.67	-0.8
3,979,332	+		ABI39_RS15365	0.67	-1.8
3,979,545	+		ABI39_RS15365	0.81	-1.3
3,979,549	+		ABI39_RS15365	0.81	-3.5
3,979,648	-		ABI39_RS15365	0.88	-4.0
3,979,843	-				-0.2
3,979,855	+				-0.8
3,979,912	-				-0.4
3,979,975	-		ABI39_RS15370	0.12	-1.6
3,980,258	-		ABI39_RS15370	0.38	-1.2
3,980,452	+		ABI39_RS15370	0.56	+0.2
3,980,459	-		ABI39_RS15370	0.57	+0.2
3,980,759	-		ABI39_RS15370	0.85	-0.4