Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS14560

Experiment: Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)
3,769,905	-				-0.8
3,770,826	+				-0.5
3,770,877	+				-2.2
3,770,928	-		ABI39_RS14560	0.18	+0.7
3,770,936	-		ABI39_RS14560	0.21	-1.5
3,770,941	+		ABI39_RS14560	0.22	-3.6
3,771,035	+		ABI39_RS14560	0.49	-3.1
3,771,041	-		ABI39_RS14560	0.50	-3.9
3,771,312	-				+0.1
3,771,345	-				+0.6
3,771,364	-				-0.1
3,771,472	+				+1.0
3,771,548	-		ABI39_RS14565	0.10	-0.4
3,771,574	+		ABI39_RS14565	0.12	+1.0
3,771,575	-		ABI39_RS14565	0.12	+0.6
3,771,575	-		ABI39_RS14565	0.12	+1.6
3,771,788	+		ABI39_RS14565	0.22	-0.7
3,771,896	+		ABI39_RS14565	0.28	-3.8
3,771,901	+		ABI39_RS14565	0.28	+0.3
3,771,901	+		ABI39_RS14565	0.28	+0.1
3,771,901	+		ABI39_RS14565	0.28	-0.6
3,772,094	+		ABI39_RS14565	0.38	-0.8
3,772,095	-		ABI39_RS14565	0.38	-0.0
3,772,098	+		ABI39_RS14565	0.38	+0.0
3,772,098	+		ABI39_RS14565	0.38	+0.7
3,772,098	+		ABI39_RS14565	0.38	+0.8
3,772,099	-		ABI39_RS14565	0.38	+0.8
3,772,099	-		ABI39_RS14565	0.38	-0.4
3,772,206	-		ABI39_RS14565	0.43	-1.7