Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10715

Experiment: Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)
2,863,275	+				+0.2
2,863,275	+				-0.1
2,863,275	+				-0.6
2,863,276	-				+0.9
2,863,276	-				-0.3
2,863,283	-				+1.3
2,863,304	-				+1.7
2,863,458	-				+1.1
2,863,556	+		ABI39_RS10710	0.17	-0.7
2,863,582	+		ABI39_RS10710	0.20	-1.2
2,863,588	+		ABI39_RS10710	0.21	-1.5
2,863,719	+		ABI39_RS10710	0.36	+1.0
2,863,720	-		ABI39_RS10710	0.36	+0.4
2,863,741	-		ABI39_RS10710	0.38	-0.1
2,863,814	+		ABI39_RS10710	0.47	+0.1
2,863,820	+		ABI39_RS10710	0.47	+0.4
2,863,820	+		ABI39_RS10710	0.47	+0.4
2,863,821	-		ABI39_RS10710	0.47	-0.6
2,863,899	-		ABI39_RS10710	0.56	-1.3
2,863,909	+		ABI39_RS10710	0.57	+0.8
2,863,945	-		ABI39_RS10710	0.62	+0.2
2,863,988	+		ABI39_RS10710	0.67	-0.0
2,864,016	+		ABI39_RS10710	0.70	-0.6
2,864,152	-		ABI39_RS10710	0.85	-0.4
2,864,362	+		ABI39_RS10715	0.29	+2.1
2,864,489	-		ABI39_RS10715	0.71	+0.5
2,864,489	-		ABI39_RS10715	0.71	+0.1
2,864,564	-				+0.0
2,864,783	+				-1.5
2,864,788	-				+0.8
2,864,929	+		ABI39_RS10720	0.25	-1.0
2,864,929	+		ABI39_RS10720	0.25	+1.7
2,865,078	+		ABI39_RS10720	0.57	-1.2
2,865,080	+		ABI39_RS10720	0.57	+1.4
2,865,095	+		ABI39_RS10720	0.60	-1.8
2,865,120	+		ABI39_RS10720	0.66	-1.0
2,865,364	-		ABI39_RS10725	0.13	-1.5
2,865,365	+		ABI39_RS10725	0.13	-0.1
2,865,389	-		ABI39_RS10725	0.16	+0.5
2,865,443	+		ABI39_RS10725	0.24	+0.3
2,865,463	+		ABI39_RS10725	0.27	-0.2
2,865,463	+		ABI39_RS10725	0.27	-1.2