Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10440

Experiment: Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)
2,792,316	+		ABI39_RS10435	0.28	-3.4
2,792,400	-		ABI39_RS10435	0.35	-1.8
2,792,424	-		ABI39_RS10435	0.37	-4.9
2,792,545	-		ABI39_RS10435	0.47	-2.3
2,792,545	-		ABI39_RS10435	0.47	-1.8
2,792,629	-		ABI39_RS10435	0.54	-4.0
2,792,687	-		ABI39_RS10435	0.58	-1.9
2,792,696	+		ABI39_RS10435	0.59	-2.8
2,792,750	-		ABI39_RS10435	0.64	-5.3
2,792,795	-		ABI39_RS10435	0.67	-5.0
2,792,796	+		ABI39_RS10435	0.67	-3.0
2,792,800	-		ABI39_RS10435	0.68	-4.1
2,792,951	+		ABI39_RS10435	0.80	-3.4
2,792,963	-		ABI39_RS10435	0.81	-5.2
2,793,022	-		ABI39_RS10435	0.86	-2.1
2,793,073	+				-0.8
2,793,074	-				-3.2
2,793,087	-				-2.8
2,793,187	+				-0.9
2,793,597	+		ABI39_RS10440	0.24	-1.3
2,793,598	-		ABI39_RS10440	0.24	-5.7
2,793,738	+		ABI39_RS10440	0.35	-2.9
2,793,748	+		ABI39_RS10440	0.36	-5.1
2,793,749	-		ABI39_RS10440	0.36	-2.2
2,793,961	+		ABI39_RS10440	0.52	-4.7
2,794,025	+		ABI39_RS10440	0.57	-1.7
2,794,323	-		ABI39_RS10440	0.80	-2.1
2,794,527	+				-4.4
2,794,680	-				-1.8
2,794,801	-				-0.3
2,794,964	-				+1.3
2,795,025	-				+0.2
2,795,084	-				+0.4
2,795,290	-		ABI39_RS10450	0.14	-0.7
2,795,316	+		ABI39_RS10450	0.16	-1.7
2,795,387	+		ABI39_RS10450	0.23	+0.4
2,795,402	+		ABI39_RS10450	0.25	-1.5
2,795,527	+		ABI39_RS10450	0.37	-0.7