Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS09420

Experiment: Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)
2,546,533	+				+1.2
2,546,656	+				-0.4
2,546,725	+		ABI39_RS09425	0.14	+0.6
2,546,725	+		ABI39_RS09425	0.14	-0.9
2,546,726	-		ABI39_RS09425	0.14	+0.9
2,546,726	-		ABI39_RS09425	0.14	-0.1
2,546,726	-		ABI39_RS09425	0.14	-0.6
2,546,780	-		ABI39_RS09425	0.18	-0.1
2,547,089	-		ABI39_RS09425	0.40	+0.4
2,547,105	+		ABI39_RS09425	0.41	+1.9
2,547,154	-		ABI39_RS09425	0.45	-1.1
2,547,279	+		ABI39_RS09425	0.54	-0.1
2,547,292	-		ABI39_RS09425	0.55	+0.1
2,547,293	+		ABI39_RS09425	0.55	+0.6
2,547,320	+		ABI39_RS09425	0.57	-0.2
2,547,321	-		ABI39_RS09425	0.57	+1.4
2,547,457	-		ABI39_RS09425	0.66	-0.0
2,547,502	+		ABI39_RS09425	0.70	-0.0
2,547,504	+		ABI39_RS09425	0.70	+0.6
2,547,504	+		ABI39_RS09425	0.70	+0.2