Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS08195

Experiment: Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)
2,190,777	+				+0.8
2,190,818	+				-1.1
2,190,819	-				-2.3
2,190,935	+		ABI39_RS08195	0.17	-1.6
2,191,114	-		ABI39_RS08195	0.39	-2.9
2,191,171	-		ABI39_RS08195	0.46	-0.6
2,191,172	+		ABI39_RS08195	0.46	-1.6
2,191,366	-		ABI39_RS08195	0.69	+0.8
2,191,403	+		ABI39_RS08195	0.74	-2.0
2,191,453	+		ABI39_RS08195	0.80	-3.9
2,191,465	-		ABI39_RS08195	0.81	-0.8
2,191,581	-				+0.6
2,191,621	-				+1.4
2,191,695	+				+0.2
2,191,695	+				+0.7
2,191,696	-				+1.3
2,191,696	-				+0.2
2,191,705	-				+0.7
2,192,198	-		ABI39_RS08200	0.83	-0.7
2,192,292	-				-2.3
2,192,352	-				-0.3
2,192,483	-				-0.0
2,192,617	-		ABI39_RS08205	0.16	-0.3