Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS08145
Experiment: Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) |
---|---|---|---|---|---|
remove | |||||
2,178,199 | - | +0.3 | |||
2,178,286 | - | +1.3 | |||
2,179,042 | + | -0.5 | |||
2,179,112 | + | +0.1 | |||
2,179,182 | + | ABI39_RS08145 | 0.11 | -1.9 | |
2,179,182 | + | ABI39_RS08145 | 0.11 | -1.5 |
Or see this region's nucleotide sequence