Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS08035

Experiment: Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C)
2,160,954	+		ABI39_RS08030	0.46	+1.0
2,160,990	+		ABI39_RS08030	0.49	+0.7
2,160,991	-		ABI39_RS08030	0.49	+0.4
2,161,106	+		ABI39_RS08030	0.57	+0.1
2,161,106	+		ABI39_RS08030	0.57	+0.4
2,161,118	-		ABI39_RS08030	0.58	-0.2
2,161,123	-		ABI39_RS08030	0.58	-0.8
2,161,128	+		ABI39_RS08030	0.59	-1.0
2,161,163	-		ABI39_RS08030	0.61	+1.1
2,161,173	+		ABI39_RS08030	0.62	-0.5
2,161,174	-		ABI39_RS08030	0.62	+0.3
2,161,200	+		ABI39_RS08030	0.64	-0.4
2,161,285	+		ABI39_RS08030	0.70	+1.0
2,161,286	-		ABI39_RS08030	0.71	-0.2
2,161,297	-		ABI39_RS08030	0.71	-0.6
2,161,329	+		ABI39_RS08030	0.74	-0.0
2,161,350	+		ABI39_RS08030	0.75	-0.7
2,161,351	-		ABI39_RS08030	0.75	-0.2
2,161,402	-		ABI39_RS08030	0.79	-0.4
2,161,450	-		ABI39_RS08030	0.83	+0.1
2,161,580	+				+0.4
2,161,580	+				-0.3
2,161,584	+				-0.2
2,161,585	-				+0.1
2,161,986	+		ABI39_RS08035	0.16	-0.7
2,162,065	+		ABI39_RS08035	0.21	-1.5
2,162,198	+		ABI39_RS08035	0.31	-0.3
2,162,198	+		ABI39_RS08035	0.31	-1.0
2,162,242	+		ABI39_RS08035	0.35	+0.3
2,162,506	+		ABI39_RS08035	0.54	-0.3
2,162,508	+		ABI39_RS08035	0.54	-0.3
2,162,571	+		ABI39_RS08035	0.59	-0.3
2,162,608	+		ABI39_RS08035	0.62	-2.4
2,162,608	+		ABI39_RS08035	0.62	+0.3
2,162,717	+		ABI39_RS08035	0.70	-1.0
2,162,796	+		ABI39_RS08035	0.76	-1.9
2,162,899	+		ABI39_RS08035	0.83	-2.3
2,163,047	+				+0.3
2,163,168	+				+0.5
2,163,175	+				+0.4